Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF549Q6P9A3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF549Q6P9A3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF549Q6P9A3 AC123595.1-201ENST00000440769 1046 ntBASIC20.72■□□□□ 0.91
ZNF549Q6P9A3 TERF1P2-201ENST00000583350 1212 ntBASIC20.72■□□□□ 0.91
ZNF549Q6P9A3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF549Q6P9A3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.72■□□□□ 0.91
ZNF549Q6P9A3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF549Q6P9A3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.72■□□□□ 0.91
ZNF549Q6P9A3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF549Q6P9A3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF549Q6P9A3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF549Q6P9A3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF549Q6P9A3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF549Q6P9A3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF549Q6P9A3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF549Q6P9A3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF549Q6P9A3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF549Q6P9A3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF549Q6P9A3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF549Q6P9A3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
ZNF549Q6P9A3 YBX1P1-201ENST00000445822 960 ntBASIC20.71■□□□□ 0.91
ZNF549Q6P9A3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF549Q6P9A3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
ZNF549Q6P9A3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
ZNF549Q6P9A3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.7■□□□□ 0.91
ZNF549Q6P9A3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
ZNF549Q6P9A3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF549Q6P9A3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF549Q6P9A3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF549Q6P9A3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF549Q6P9A3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.7■□□□□ 0.9
ZNF549Q6P9A3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.7■□□□□ 0.9
ZNF549Q6P9A3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.7■□□□□ 0.9
ZNF549Q6P9A3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.7■□□□□ 0.9
ZNF549Q6P9A3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF549Q6P9A3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF549Q6P9A3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF549Q6P9A3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF549Q6P9A3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF549Q6P9A3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.7■□□□□ 0.9
ZNF549Q6P9A3 PLK5-205ENST00000642079 1969 ntBASIC20.7■□□□□ 0.9
ZNF549Q6P9A3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF549Q6P9A3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF549Q6P9A3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ZNF549Q6P9A3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ZNF549Q6P9A3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF549Q6P9A3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF549Q6P9A3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.69■□□□□ 0.9
ZNF549Q6P9A3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ZNF549Q6P9A3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF549Q6P9A3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ZNF549Q6P9A3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.69■□□□□ 0.9
ZNF549Q6P9A3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF549Q6P9A3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF549Q6P9A3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF549Q6P9A3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF549Q6P9A3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF549Q6P9A3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF549Q6P9A3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ZNF549Q6P9A3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF549Q6P9A3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF549Q6P9A3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF549Q6P9A3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF549Q6P9A3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF549Q6P9A3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF549Q6P9A3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.68■□□□□ 0.9
ZNF549Q6P9A3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ZNF549Q6P9A3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.68■□□□□ 0.9
ZNF549Q6P9A3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ZNF549Q6P9A3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF549Q6P9A3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.68■□□□□ 0.9
ZNF549Q6P9A3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF549Q6P9A3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF549Q6P9A3 CCDC92B-201ENST00000575506 885 ntBASIC20.68■□□□□ 0.9
ZNF549Q6P9A3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.68■□□□□ 0.9
ZNF549Q6P9A3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.68■□□□□ 0.9
ZNF549Q6P9A3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF549Q6P9A3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF549Q6P9A3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF549Q6P9A3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.68■□□□□ 0.9
ZNF549Q6P9A3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF549Q6P9A3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF549Q6P9A3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF549Q6P9A3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.67■□□□□ 0.9
ZNF549Q6P9A3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF549Q6P9A3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
ZNF549Q6P9A3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.67■□□□□ 0.9
ZNF549Q6P9A3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF549Q6P9A3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.67■□□□□ 0.9
ZNF549Q6P9A3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF549Q6P9A3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.67■□□□□ 0.9
ZNF549Q6P9A3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF549Q6P9A3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.67■□□□□ 0.9
ZNF549Q6P9A3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.67■□□□□ 0.9
ZNF549Q6P9A3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF549Q6P9A3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.67■□□□□ 0.9
ZNF549Q6P9A3 AC138907.5-202ENST00000569484 235 ntBASIC20.67■□□□□ 0.9
ZNF549Q6P9A3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF549Q6P9A3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms