Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 SMUG1P1-201ENST00000590640 811 ntBASIC18.06■□□□□ 0.48
ATPAF1Q5TC12 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATPAF1Q5TC12 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATPAF1Q5TC12 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
ATPAF1Q5TC12 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATPAF1Q5TC12 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATPAF1Q5TC12 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
ATPAF1Q5TC12 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.05■□□□□ 0.48
ATPAF1Q5TC12 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATPAF1Q5TC12 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ATPAF1Q5TC12 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.05■□□□□ 0.48
ATPAF1Q5TC12 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATPAF1Q5TC12 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.05■□□□□ 0.48
ATPAF1Q5TC12 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.05■□□□□ 0.48
ATPAF1Q5TC12 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.05■□□□□ 0.48
ATPAF1Q5TC12 AC105233.4-201ENST00000642045 216 ntBASIC18.05■□□□□ 0.48
ATPAF1Q5TC12 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATPAF1Q5TC12 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATPAF1Q5TC12 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.05■□□□□ 0.48
ATPAF1Q5TC12 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATPAF1Q5TC12 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATPAF1Q5TC12 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ATPAF1Q5TC12 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATPAF1Q5TC12 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.05■□□□□ 0.48
ATPAF1Q5TC12 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATPAF1Q5TC12 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATPAF1Q5TC12 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATPAF1Q5TC12 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
ATPAF1Q5TC12 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATPAF1Q5TC12 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.04■□□□□ 0.48
ATPAF1Q5TC12 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATPAF1Q5TC12 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATPAF1Q5TC12 AC007952.6-201ENST00000573168 2673 ntBASIC18.04■□□□□ 0.48
ATPAF1Q5TC12 AC003957.1-201ENST00000625108 2673 ntBASIC18.04■□□□□ 0.48
ATPAF1Q5TC12 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ATPAF1Q5TC12 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
ATPAF1Q5TC12 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ATPAF1Q5TC12 AL354811.1-201ENST00000610286 706 ntBASIC18.04■□□□□ 0.48
ATPAF1Q5TC12 AL358852.1-201ENST00000623174 1268 ntBASIC18.04■□□□□ 0.48
ATPAF1Q5TC12 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATPAF1Q5TC12 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
ATPAF1Q5TC12 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
ATPAF1Q5TC12 FEM1AP1-201ENST00000431297 1995 ntBASIC18.04■□□□□ 0.48
ATPAF1Q5TC12 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.04■□□□□ 0.48
ATPAF1Q5TC12 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.04■□□□□ 0.48
ATPAF1Q5TC12 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
ATPAF1Q5TC12 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATPAF1Q5TC12 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATPAF1Q5TC12 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATPAF1Q5TC12 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.03■□□□□ 0.48
ATPAF1Q5TC12 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.03■□□□□ 0.48
ATPAF1Q5TC12 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
ATPAF1Q5TC12 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.03■□□□□ 0.48
ATPAF1Q5TC12 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATPAF1Q5TC12 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATPAF1Q5TC12 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
ATPAF1Q5TC12 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.03■□□□□ 0.48
ATPAF1Q5TC12 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.03■□□□□ 0.48
ATPAF1Q5TC12 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.03■□□□□ 0.48
ATPAF1Q5TC12 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.03■□□□□ 0.48
ATPAF1Q5TC12 AC012414.1-201ENST00000556676 535 ntBASIC18.03■□□□□ 0.48
ATPAF1Q5TC12 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.03■□□□□ 0.48
ATPAF1Q5TC12 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.03■□□□□ 0.48
ATPAF1Q5TC12 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATPAF1Q5TC12 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.03■□□□□ 0.48
ATPAF1Q5TC12 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
ATPAF1Q5TC12 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ATPAF1Q5TC12 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATPAF1Q5TC12 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
ATPAF1Q5TC12 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
ATPAF1Q5TC12 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
ATPAF1Q5TC12 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATPAF1Q5TC12 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.03■□□□□ 0.48
ATPAF1Q5TC12 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATPAF1Q5TC12 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
ATPAF1Q5TC12 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.02■□□□□ 0.48
ATPAF1Q5TC12 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATPAF1Q5TC12 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ATPAF1Q5TC12 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
ATPAF1Q5TC12 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ATPAF1Q5TC12 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATPAF1Q5TC12 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATPAF1Q5TC12 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATPAF1Q5TC12 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.02■□□□□ 0.48
ATPAF1Q5TC12 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.02■□□□□ 0.48
ATPAF1Q5TC12 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.02■□□□□ 0.48
ATPAF1Q5TC12 AL034346.1-201ENST00000568244 1277 ntBASIC18.02■□□□□ 0.48
ATPAF1Q5TC12 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ATPAF1Q5TC12 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATPAF1Q5TC12 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ATPAF1Q5TC12 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ATPAF1Q5TC12 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATPAF1Q5TC12 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATPAF1Q5TC12 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
ATPAF1Q5TC12 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.01■□□□□ 0.47
ATPAF1Q5TC12 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.01■□□□□ 0.47
ATPAF1Q5TC12 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATPAF1Q5TC12 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATPAF1Q5TC12 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATPAF1Q5TC12 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms