Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRK2Q5S007 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRRK2Q5S007 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRRK2Q5S007 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
LRRK2Q5S007 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.39■□□□□ 0.53
LRRK2Q5S007 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRK2Q5S007 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.39■□□□□ 0.53
LRRK2Q5S007 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.39■□□□□ 0.53
LRRK2Q5S007 KRT18P22-201ENST00000402024 1347 ntBASIC18.39■□□□□ 0.53
LRRK2Q5S007 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LRRK2Q5S007 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRRK2Q5S007 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
LRRK2Q5S007 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
LRRK2Q5S007 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.39■□□□□ 0.53
LRRK2Q5S007 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRRK2Q5S007 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.39■□□□□ 0.53
LRRK2Q5S007 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRK2Q5S007 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
LRRK2Q5S007 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.38■□□□□ 0.53
LRRK2Q5S007 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRK2Q5S007 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
LRRK2Q5S007 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRK2Q5S007 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LRRK2Q5S007 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.38■□□□□ 0.53
LRRK2Q5S007 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRK2Q5S007 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRK2Q5S007 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRK2Q5S007 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
LRRK2Q5S007 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRK2Q5S007 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
LRRK2Q5S007 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.38■□□□□ 0.53
LRRK2Q5S007 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRK2Q5S007 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.38■□□□□ 0.53
LRRK2Q5S007 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LRRK2Q5S007 AC026471.5-201ENST00000615068 467 ntBASIC18.38■□□□□ 0.53
LRRK2Q5S007 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.38■□□□□ 0.53
LRRK2Q5S007 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRRK2Q5S007 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRK2Q5S007 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRK2Q5S007 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRRK2Q5S007 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRK2Q5S007 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRRK2Q5S007 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.37■□□□□ 0.53
LRRK2Q5S007 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.37■□□□□ 0.53
LRRK2Q5S007 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
LRRK2Q5S007 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.37■□□□□ 0.53
LRRK2Q5S007 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRRK2Q5S007 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRK2Q5S007 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRK2Q5S007 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRK2Q5S007 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.37■□□□□ 0.53
LRRK2Q5S007 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
LRRK2Q5S007 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.37■□□□□ 0.53
LRRK2Q5S007 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LRRK2Q5S007 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.37■□□□□ 0.53
LRRK2Q5S007 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.37■□□□□ 0.53
LRRK2Q5S007 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
LRRK2Q5S007 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LRRK2Q5S007 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRRK2Q5S007 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRRK2Q5S007 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.36■□□□□ 0.53
LRRK2Q5S007 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
LRRK2Q5S007 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
LRRK2Q5S007 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRRK2Q5S007 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
LRRK2Q5S007 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.36■□□□□ 0.53
LRRK2Q5S007 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
LRRK2Q5S007 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
LRRK2Q5S007 AL121894.2-201ENST00000602977 491 ntBASIC18.36■□□□□ 0.53
LRRK2Q5S007 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.36■□□□□ 0.53
LRRK2Q5S007 AC113410.3-201ENST00000623366 203 ntBASIC18.36■□□□□ 0.53
LRRK2Q5S007 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRRK2Q5S007 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.36■□□□□ 0.53
LRRK2Q5S007 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.36■□□□□ 0.53
LRRK2Q5S007 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRK2Q5S007 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRK2Q5S007 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRK2Q5S007 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRK2Q5S007 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRK2Q5S007 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRK2Q5S007 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRK2Q5S007 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRK2Q5S007 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.35■□□□□ 0.53
LRRK2Q5S007 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRK2Q5S007 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
LRRK2Q5S007 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRK2Q5S007 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRK2Q5S007 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.35■□□□□ 0.53
LRRK2Q5S007 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.35■□□□□ 0.53
LRRK2Q5S007 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LRRK2Q5S007 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.35■□□□□ 0.53
LRRK2Q5S007 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRK2Q5S007 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRK2Q5S007 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRK2Q5S007 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.35■□□□□ 0.53
LRRK2Q5S007 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.35■□□□□ 0.53
LRRK2Q5S007 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRK2Q5S007 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRK2Q5S007 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.34■□□□□ 0.53
LRRK2Q5S007 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms