Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 YJL133C-AYJL133C-A 225 nt3.19□□□□□ -1.9
VPS38Q05919 YKL070WYKL070W 510 nt3.19□□□□□ -1.9
VPS38Q05919 ATP11YNL315C 957 nt3.19□□□□□ -1.9
VPS38Q05919 YCL002CYCL002C 792 nt3.19□□□□□ -1.9
VPS38Q05919 YLR278CYLR278C 4026 nt3.19□□□□□ -1.9
VPS38Q05919 NUR1YDL089W 1455 nt3.19□□□□□ -1.9
VPS38Q05919 LCB4YOR171C 1875 nt3.19□□□□□ -1.9
VPS38Q05919 MSB2YGR014W 3921 nt3.19□□□□□ -1.9
VPS38Q05919 YCG1YDR325W 3108 nt3.19□□□□□ -1.9
VPS38Q05919 YDR061WYDR061W 1620 nt3.19□□□□□ -1.9
VPS38Q05919 TIF4631YGR162W 2859 nt3.18□□□□□ -1.9
VPS38Q05919 BUD4YJR092W 4344 nt3.18□□□□□ -1.9
VPS38Q05919 SRD1YCR018C 666 nt3.18□□□□□ -1.9
VPS38Q05919 RSM28YDR494W 1086 nt3.18□□□□□ -1.9
VPS38Q05919 RRT13YER066W 558 nt3.18□□□□□ -1.9
VPS38Q05919 RPB9YGL070C 369 nt3.18□□□□□ -1.9
VPS38Q05919 PPX1YHR201C 1194 nt3.18□□□□□ -1.9
VPS38Q05919 YIL169CYIL169C 2988 nt3.18□□□□□ -1.9
VPS38Q05919 YKE2YLR200W 345 nt3.18□□□□□ -1.9
VPS38Q05919 RPL6AYML073C 531 nt3.18□□□□□ -1.9
VPS38Q05919 YOR385WYOR385W 873 nt3.18□□□□□ -1.9
VPS38Q05919 STE23YLR389C 3084 nt3.18□□□□□ -1.9
VPS38Q05919 MYO5YMR109W 3660 nt3.17□□□□□ -1.9
VPS38Q05919 MAK21YDR060W 3078 nt3.17□□□□□ -1.9
VPS38Q05919 STE6YKL209C 3873 nt3.17□□□□□ -1.9
VPS38Q05919 SSE2YBR169C 2082 nt3.17□□□□□ -1.9
VPS38Q05919 YCR013CYCR013C 648 nt3.17□□□□□ -1.9
VPS38Q05919 UBC5YDR059C 447 nt3.17□□□□□ -1.9
VPS38Q05919 CPR5YDR304C 678 nt3.17□□□□□ -1.9
VPS38Q05919 SLD5YDR489W 885 nt3.17□□□□□ -1.9
VPS38Q05919 LST7YGR057C 729 nt3.17□□□□□ -1.9
VPS38Q05919 YHR054CYHR054C 1065 nt3.17□□□□□ -1.9
VPS38Q05919 YLR154C-HYLR154C-H 132 nt3.17□□□□□ -1.9
VPS38Q05919 YLR156C-AYLR156C-A 132 nt3.17□□□□□ -1.9
VPS38Q05919 YLR157C-CYLR157C-C 132 nt3.17□□□□□ -1.9
VPS38Q05919 YLR159C-AYLR159C-A 132 nt3.17□□□□□ -1.9
VPS38Q05919 ERG29YMR134W 714 nt3.17□□□□□ -1.9
VPS38Q05919 YBL065WYBL065W 345 nt3.17□□□□□ -1.9
VPS38Q05919 YPL119C-AYPL119C-A 264 nt3.17□□□□□ -1.9
VPS38Q05919 YBR063CYBR063C 1215 nt3.17□□□□□ -1.9
VPS38Q05919 MAK5YBR142W 2322 nt3.17□□□□□ -1.9
VPS38Q05919 VPS3YDR495C 3036 nt3.17□□□□□ -1.9
VPS38Q05919 EMP70YLR083C 2004 nt3.16□□□□□ -1.9
VPS38Q05919 YIL046W-AYIL046W-A 165 nt3.16□□□□□ -1.9
VPS38Q05919 SDP1YIL113W 630 nt3.16□□□□□ -1.9
VPS38Q05919 YNR025CYNR025C 360 nt3.16□□□□□ -1.9
VPS38Q05919 GRE2YOL151W 1029 nt3.16□□□□□ -1.9
VPS38Q05919 BUD21YOR078W 645 nt3.16□□□□□ -1.9
VPS38Q05919 RGC1YPR115W 3252 nt3.16□□□□□ -1.9
VPS38Q05919 ANR2YKL047W 1551 nt3.16□□□□□ -1.9
VPS38Q05919 BCH1YMR237W 2175 nt3.15□□□□□ -1.9
VPS38Q05919 EMI1YDR512C 564 nt3.15□□□□□ -1.91
VPS38Q05919 YFR054CYFR054C 579 nt3.15□□□□□ -1.91
VPS38Q05919 VEL1YGL258W 621 nt3.15□□□□□ -1.91
VPS38Q05919 AIM18YHR198C 966 nt3.15□□□□□ -1.91
VPS38Q05919 YJL147CYJL147C 1149 nt3.15□□□□□ -1.91
VPS38Q05919 YMR141CYMR141C 309 nt3.15□□□□□ -1.91
VPS38Q05919 YNL089CYNL089C 477 nt3.15□□□□□ -1.91
VPS38Q05919 YNL109WYNL109W 546 nt3.15□□□□□ -1.91
VPS38Q05919 SHG1YBR258C 429 nt3.15□□□□□ -1.91
VPS38Q05919 ADF1YCL058W-A 342 nt3.15□□□□□ -1.91
VPS38Q05919 CDH1YGL003C 1701 nt3.15□□□□□ -1.91
VPS38Q05919 MNT3YIL014W 1893 nt3.15□□□□□ -1.91
VPS38Q05919 PDS5YMR076C 3834 nt3.15□□□□□ -1.91
VPS38Q05919 MDV1YJL112W 2145 nt3.14□□□□□ -1.91
VPS38Q05919 YKL222CYKL222C 2118 nt3.14□□□□□ -1.91
VPS38Q05919 BRE5YNR051C 1548 nt3.14□□□□□ -1.91
VPS38Q05919 SLK19YOR195W 2466 nt3.14□□□□□ -1.91
VPS38Q05919 YFR009W-AYFR009W-A 258 nt3.14□□□□□ -1.91
VPS38Q05919 DSE2YHR143W 978 nt3.14□□□□□ -1.91
VPS38Q05919 AIM19YIL087C 474 nt3.14□□□□□ -1.91
VPS38Q05919 RNR2YJL026W 1200 nt3.14□□□□□ -1.91
VPS38Q05919 YKL123WYKL123W 381 nt3.14□□□□□ -1.91
VPS38Q05919 MRPL16YBL038W 699 nt3.14□□□□□ -1.91
VPS38Q05919 DYN3YMR299C 939 nt3.14□□□□□ -1.91
VPS38Q05919 YCL007CYCL007C 393 nt3.14□□□□□ -1.91
VPS38Q05919 ILS1YBL076C 3219 nt3.14□□□□□ -1.91
VPS38Q05919 ROM1YGR070W 3468 nt3.14□□□□□ -1.91
VPS38Q05919 BNI4YNL233W 2679 nt3.13□□□□□ -1.91
VPS38Q05919 TFC1YBR123C 1950 nt3.13□□□□□ -1.91
VPS38Q05919 REF2YDR195W 1602 nt3.13□□□□□ -1.91
VPS38Q05919 STP2YHR006W 1626 nt3.13□□□□□ -1.91
VPS38Q05919 YCR045W-AYCR045W-A 351 nt3.13□□□□□ -1.91
VPS38Q05919 HLR1YDR528W 1272 nt3.13□□□□□ -1.91
VPS38Q05919 RSM18YER050C 417 nt3.13□□□□□ -1.91
VPS38Q05919 AST2YER101C 1293 nt3.13□□□□□ -1.91
VPS38Q05919 THG1YGR024C 714 nt3.13□□□□□ -1.91
VPS38Q05919 MVB12YGR206W 306 nt3.13□□□□□ -1.91
VPS38Q05919 RPS21BYJL136C 264 nt3.13□□□□□ -1.91
VPS38Q05919 SSN8YNL025C 972 nt3.13□□□□□ -1.91
VPS38Q05919 YOR277CYOR277C 309 nt3.13□□□□□ -1.91
VPS38Q05919 YFL002W-BYFL002W-B 1317 nt3.13□□□□□ -1.91
VPS38Q05919 TLC1TLC1 1301 nt3.13□□□□□ -1.91
VPS38Q05919 YGR161W-AYGR161W-A 1317 nt3.13□□□□□ -1.91
VPS38Q05919 YBL100W-AYBL100W-A 1317 nt3.13□□□□□ -1.91
VPS38Q05919 YCL020WYCL020W 1317 nt3.13□□□□□ -1.91
VPS38Q05919 ESL1YIL151C 3357 nt3.12□□□□□ -1.91
VPS38Q05919 PPH3YDR075W 927 nt3.12□□□□□ -1.91
VPS38Q05919 PAU10YDR542W 363 nt3.12□□□□□ -1.91
VPS38Q05919 PAU11YGL261C 363 nt3.12□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 29.7 ms