Protein–RNA interactions for Protein: Q01560

NPL3, Nucleolar protein 3, yeastyeast

Known RBP RIP-Chip data

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NPL3Q01560 YAR060CYAR060C 336 nt4.14□□□□□ -1.75
NPL3Q01560 YBL039W-BYBL039W-B 180 nt4.14□□□□□ -1.75
NPL3Q01560 IDH2YOR136W 1110 nt4.14□□□□□ -1.75
NPL3Q01560 YPR197CYPR197C 564 nt4.14□□□□□ -1.75
NPL3Q01560 AVT5YBL089W 1380 nt4.14□□□□□ -1.75
NPL3Q01560 FLO8YER109C 2400 nt4.13□□□□□ -1.75
NPL3Q01560 FMN1YDR236C 657 nt4.13□□□□□ -1.75
NPL3Q01560 YER087C-AYER087C-A 552 nt4.13□□□□□ -1.75
NPL3Q01560 YER119C-AYER119C-A 372 nt4.13□□□□□ -1.75
NPL3Q01560 VFA1YER128W 612 nt4.13□□□□□ -1.75 RIP-Chip
NPL3Q01560 YGL108CYGL108C 423 nt4.13□□□□□ -1.75 RIP-Chip
NPL3Q01560 RPS4BYHR203C 786 nt4.13□□□□□ -1.75
NPL3Q01560 YKL083WYKL083W 615 nt4.13□□□□□ -1.75
NPL3Q01560 YKT6YKL196C 603 nt4.13□□□□□ -1.75
NPL3Q01560 ATX1YNL259C 222 nt4.13□□□□□ -1.75
NPL3Q01560 YPL038W-AYPL038W-A 192 nt4.13□□□□□ -1.75
NPL3Q01560 VID27YNL212W 2349 nt4.13□□□□□ -1.75
NPL3Q01560 SHE4YOR035C 2370 nt4.13□□□□□ -1.75
NPL3Q01560 FUN12YAL035W 3009 nt4.13□□□□□ -1.75
NPL3Q01560 RNT1YMR239C 1416 nt4.12□□□□□ -1.75
NPL3Q01560 MSK1YNL073W 1731 nt4.12□□□□□ -1.75
NPL3Q01560 snR59snR59 78 nt4.12□□□□□ -1.75
NPL3Q01560 MIC19YFR011C 513 nt4.12□□□□□ -1.75 RIP-Chip
NPL3Q01560 YIR020CYIR020C 303 nt4.12□□□□□ -1.75
NPL3Q01560 YAL004WYAL004W 648 nt4.12□□□□□ -1.75
NPL3Q01560 RPL14AYKL006W 417 nt4.12□□□□□ -1.75
NPL3Q01560 AFB1YLR040C 675 nt4.12□□□□□ -1.75 RIP-Chip
NPL3Q01560 YLR297WYLR297W 390 nt4.12□□□□□ -1.75
NPL3Q01560 ARC18YLR370C 537 nt4.12□□□□□ -1.75 RIP-Chip
NPL3Q01560 SVS1YPL163C 783 nt4.12□□□□□ -1.75 RIP-Chip
NPL3Q01560 YBR062CYBR062C 543 nt4.12□□□□□ -1.75
NPL3Q01560 DER1YBR201W 636 nt4.12□□□□□ -1.75
NPL3Q01560 TDA1YMR291W 1761 nt4.12□□□□□ -1.75 RIP-Chip
NPL3Q01560 AVT7YIL088C 1473 nt4.11□□□□□ -1.75
NPL3Q01560 NCS2YNL119W 1482 nt4.11□□□□□ -1.75
NPL3Q01560 RAD1YPL022W 3303 nt4.11□□□□□ -1.75
NPL3Q01560 CAF130YGR134W 3369 nt4.11□□□□□ -1.75
NPL3Q01560 DAS1YJL149W 1992 nt4.11□□□□□ -1.75
NPL3Q01560 YER079WYER079W 633 nt4.11□□□□□ -1.75 RIP-Chip
NPL3Q01560 RPL11BYGR085C 525 nt4.11□□□□□ -1.75 RIP-Chip
NPL3Q01560 BIG1YHR101C 1008 nt4.11□□□□□ -1.75 RIP-Chip
NPL3Q01560 YIR036W-AYIR036W-A 402 nt4.11□□□□□ -1.75
NPL3Q01560 YLR224WYLR224W 1110 nt4.11□□□□□ -1.75
NPL3Q01560 CMC2YBL059C-A 330 nt4.11□□□□□ -1.75
NPL3Q01560 YOL114CYOL114C 609 nt4.11□□□□□ -1.75 RIP-Chip
NPL3Q01560 RPL11AYPR102C 525 nt4.11□□□□□ -1.75 RIP-Chip
NPL3Q01560 RPL19AYBR084C-A 570 nt4.11□□□□□ -1.75 RIP-Chip
NPL3Q01560 POL4YCR014C 1749 nt4.11□□□□□ -1.75
NPL3Q01560 STI1YOR027W 1770 nt4.11□□□□□ -1.75
NPL3Q01560 UPC2YDR213W 2742 nt4.11□□□□□ -1.75
NPL3Q01560 MIS1YBR084W 2928 nt4.11□□□□□ -1.75
NPL3Q01560 TRS85YDR108W 2097 nt4.1□□□□□ -1.75
NPL3Q01560 FAR8YMR029C 1572 nt4.1□□□□□ -1.75
NPL3Q01560 YKL050CYKL050C 2769 nt4.1□□□□□ -1.75
NPL3Q01560 SDC1YDR469W 528 nt4.1□□□□□ -1.75 RIP-Chip
NPL3Q01560 YER068C-AYER068C-A 432 nt4.1□□□□□ -1.75
NPL3Q01560 YHR138CYHR138C 345 nt4.1□□□□□ -1.75 RIP-Chip
NPL3Q01560 YJL086CYJL086C 369 nt4.1□□□□□ -1.75
NPL3Q01560 RDN5-1RDN5-1 121 nt4.1□□□□□ -1.75
NPL3Q01560 RDN5-6RDN5-6 121 nt4.1□□□□□ -1.75
NPL3Q01560 FLD1YLR404W 858 nt4.1□□□□□ -1.75
NPL3Q01560 RIM9YMR063W 720 nt4.1□□□□□ -1.75
NPL3Q01560 RPL16BYNL069C 597 nt4.1□□□□□ -1.75 RIP-Chip
NPL3Q01560 YPL025CYPL025C 558 nt4.1□□□□□ -1.75
NPL3Q01560 snR17asnR17a 333 nt4.1□□□□□ -1.75
NPL3Q01560 RIM13YMR154C 2184 nt4.1□□□□□ -1.75 RIP-Chip
NPL3Q01560 KIN2YLR096W 3444 nt4.09□□□□□ -1.75
NPL3Q01560 VAC14YLR386W 2643 nt4.09□□□□□ -1.75
NPL3Q01560 YLR177WYLR177W 1887 nt4.09□□□□□ -1.75
NPL3Q01560 YSH1YLR277C 2340 nt4.09□□□□□ -1.75
NPL3Q01560 YDR537CYDR537C 606 nt4.09□□□□□ -1.75
NPL3Q01560 MVB12YGR206W 306 nt4.09□□□□□ -1.75 RIP-Chip
NPL3Q01560 RPS20YHL015W 366 nt4.09□□□□□ -1.75 RIP-Chip
NPL3Q01560 YIL175WYIL175W 318 nt4.09□□□□□ -1.75
NPL3Q01560 YMR153C-AYMR153C-A 336 nt4.09□□□□□ -1.75
NPL3Q01560 LDS2YOL047C 1071 nt4.09□□□□□ -1.75
NPL3Q01560 YOL159CYOL159C 516 nt4.09□□□□□ -1.75
NPL3Q01560 YOR225WYOR225W 330 nt4.09□□□□□ -1.75
NPL3Q01560 SMI1YGR229C 1518 nt4.09□□□□□ -1.75
NPL3Q01560 KAR9YPL269W 1935 nt4.09□□□□□ -1.76
NPL3Q01560 DIP2YLR129W 2832 nt4.08□□□□□ -1.76
NPL3Q01560 TMA17YDL110C 453 nt4.08□□□□□ -1.76 RIP-Chip
NPL3Q01560 ARF1YDL192W 546 nt4.08□□□□□ -1.76
NPL3Q01560 GDI1YER136W 1356 nt4.08□□□□□ -1.76
NPL3Q01560 TIF4631YGR162W 2859 nt4.08□□□□□ -1.76
NPL3Q01560 PET54YGR222W 882 nt4.08□□□□□ -1.76
NPL3Q01560 YJL132WYJL132W 2253 nt4.08□□□□□ -1.76
NPL3Q01560 UTP11YKL099C 753 nt4.08□□□□□ -1.76 RIP-Chip
NPL3Q01560 PDP3YLR455W 915 nt4.08□□□□□ -1.76 RIP-Chip
NPL3Q01560 YNR065CYNR065C 3351 nt4.08□□□□□ -1.76
NPL3Q01560 SRP68YPL243W 1800 nt4.07□□□□□ -1.76
NPL3Q01560 HOYDL227C 1761 nt4.07□□□□□ -1.76
NPL3Q01560 EXO5YBR163W 1758 nt4.07□□□□□ -1.76
NPL3Q01560 VPS73YGL104C 1461 nt4.07□□□□□ -1.76
NPL3Q01560 ARG5,6YER069W 2592 nt4.07□□□□□ -1.76
NPL3Q01560 YGL063C-AYGL063C-A 150 nt4.07□□□□□ -1.76
NPL3Q01560 ECL1YGR146C 636 nt4.07□□□□□ -1.76 RIP-Chip
NPL3Q01560 YAP3YHL009C 993 nt4.07□□□□□ -1.76 RIP-Chip
NPL3Q01560 YHL026CYHL026C 948 nt4.07□□□□□ -1.76 RIP-Chip
NPL3Q01560 YAL068W-AYAL068W-A 255 nt4.07□□□□□ -1.76
Retrieved 100 of 7,029 protein–RNA pairs in 49 ms