Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 YGL015CYGL015C 393 nt4.46□□□□□ -1.7
UBP3Q01477 GOS1YHL031C 672 nt4.46□□□□□ -1.7
UBP3Q01477 YJR111CYJR111C 852 nt4.46□□□□□ -1.7
UBP3Q01477 CSE4YKL049C 690 nt4.46□□□□□ -1.7
UBP3Q01477 YKL136WYKL136W 399 nt4.46□□□□□ -1.7
UBP3Q01477 YOR131CYOR131C 657 nt4.46□□□□□ -1.7
UBP3Q01477 YPL225WYPL225W 441 nt4.46□□□□□ -1.7
UBP3Q01477 RAD1YPL022W 3303 nt4.46□□□□□ -1.7
UBP3Q01477 GAL80YML051W 1308 nt4.46□□□□□ -1.7
UBP3Q01477 TPO5YKL174C 1857 nt4.45□□□□□ -1.7 RIP-Chip
UBP3Q01477 ATP5YDR298C 639 nt4.45□□□□□ -1.7
UBP3Q01477 TDA2YER071C 381 nt4.45□□□□□ -1.7
UBP3Q01477 HOP2YGL033W 657 nt4.45□□□□□ -1.7
UBP3Q01477 YGL108CYGL108C 423 nt4.45□□□□□ -1.7
UBP3Q01477 RTS3YGR161C 792 nt4.45□□□□□ -1.7
UBP3Q01477 PIR1YKL164C 1026 nt4.45□□□□□ -1.7
UBP3Q01477 YLL044WYLL044W 447 nt4.45□□□□□ -1.7
UBP3Q01477 YPL025CYPL025C 558 nt4.45□□□□□ -1.7
UBP3Q01477 DPB3YBR278W 606 nt4.45□□□□□ -1.7
UBP3Q01477 APC5YOR249C 2058 nt4.45□□□□□ -1.7 RIP-Chip
UBP3Q01477 GCD10YNL062C 1437 nt4.45□□□□□ -1.7
UBP3Q01477 AEP1YMR064W 1557 nt4.44□□□□□ -1.7
UBP3Q01477 PSP1YDR505C 2526 nt4.44□□□□□ -1.7 RIP-Chip
UBP3Q01477 MCD4YKL165C 2760 nt4.44□□□□□ -1.7
UBP3Q01477 UPC2YDR213W 2742 nt4.44□□□□□ -1.7
UBP3Q01477 FAD1YDL045C 921 nt4.44□□□□□ -1.7 RIP-Chip
UBP3Q01477 DAD2YKR083C 402 nt4.44□□□□□ -1.7
UBP3Q01477 ERG2YMR202W 669 nt4.44□□□□□ -1.7
UBP3Q01477 YAF9YNL107W 681 nt4.44□□□□□ -1.7
UBP3Q01477 YNL150WYNL150W 408 nt4.44□□□□□ -1.7
UBP3Q01477 YPL197CYPL197C 414 nt4.44□□□□□ -1.7
UBP3Q01477 FRT2YAL028W 1587 nt4.44□□□□□ -1.7 RIP-Chip
UBP3Q01477 HFD1YMR110C 1599 nt4.44□□□□□ -1.7
UBP3Q01477 MSK1YNL073W 1731 nt4.43□□□□□ -1.7
UBP3Q01477 SNF2YOR290C 5112 nt4.43□□□□□ -1.7 RIP-Chip
UBP3Q01477 SOL4YGR248W 768 nt4.43□□□□□ -1.7
UBP3Q01477 MTM1YGR257C 1101 nt4.43□□□□□ -1.7
UBP3Q01477 CGI121YML036W 546 nt4.43□□□□□ -1.7
UBP3Q01477 YML108WYML108W 318 nt4.43□□□□□ -1.7
UBP3Q01477 RPL13BYMR142C 600 nt4.43□□□□□ -1.7
UBP3Q01477 YDR089WYDR089W 2610 nt4.43□□□□□ -1.7
UBP3Q01477 PEX6YNL329C 3093 nt4.43□□□□□ -1.7
UBP3Q01477 CAF130YGR134W 3369 nt4.43□□□□□ -1.7
UBP3Q01477 SEC6YIL068C 2418 nt4.43□□□□□ -1.7 RIP-Chip
UBP3Q01477 PIM1YBL022C 3402 nt4.42□□□□□ -1.7
UBP3Q01477 LYS2YBR115C 4179 nt4.42□□□□□ -1.7
UBP3Q01477 RIA1YNL163C 3333 nt4.42□□□□□ -1.7
UBP3Q01477 HTA1YDR225W 399 nt4.42□□□□□ -1.7
UBP3Q01477 PMC1YGL006W 3522 nt4.42□□□□□ -1.7
UBP3Q01477 COQ5YML110C 924 nt4.42□□□□□ -1.7
UBP3Q01477 FUS2YMR232W 2034 nt4.42□□□□□ -1.7
UBP3Q01477 RRT16YNL105W 429 nt4.42□□□□□ -1.7
UBP3Q01477 MNT4YNR059W 1743 nt4.42□□□□□ -1.7 RIP-Chip
UBP3Q01477 COQ10YOL008W 624 nt4.42□□□□□ -1.7
UBP3Q01477 KIN2YLR096W 3444 nt4.42□□□□□ -1.7
UBP3Q01477 EMC1YCL045C 2283 nt4.42□□□□□ -1.7 RIP-Chip
UBP3Q01477 CDC14YFR028C 1656 nt4.41□□□□□ -1.7
UBP3Q01477 GDI1YER136W 1356 nt4.41□□□□□ -1.7
UBP3Q01477 STP1YDR463W 1560 nt4.41□□□□□ -1.7
UBP3Q01477 MSL5YLR116W 1431 nt4.41□□□□□ -1.7
UBP3Q01477 HSP30YCR021C 999 nt4.41□□□□□ -1.7
UBP3Q01477 YDL228CYDL228C 642 nt4.41□□□□□ -1.7
UBP3Q01477 YDR246W-AYDR246W-A 201 nt4.41□□□□□ -1.7
UBP3Q01477 FMP10YER182W 735 nt4.41□□□□□ -1.7
UBP3Q01477 MAM33YIL070C 801 nt4.41□□□□□ -1.7
UBP3Q01477 MCM22YJR135C 720 nt4.41□□□□□ -1.7 RIP-Chip
UBP3Q01477 TOG1YER184C 2385 nt4.41□□□□□ -1.7
UBP3Q01477 RPN6YDL097C 1305 nt4.41□□□□□ -1.7
UBP3Q01477 SYO1YDL063C 1863 nt4.41□□□□□ -1.7 RIP-Chip
UBP3Q01477 ERB1YMR049C 2424 nt4.41□□□□□ -1.7
UBP3Q01477 IRC3YDR332W 2070 nt4.41□□□□□ -1.7 RIP-Chip
UBP3Q01477 MDM36YPR083W 1740 nt4.41□□□□□ -1.7 RIP-Chip
UBP3Q01477 YRM1YOR172W 2361 nt4.4□□□□□ -1.7
UBP3Q01477 YDR115WYDR115W 318 nt4.4□□□□□ -1.71
UBP3Q01477 NTF2YER009W 378 nt4.4□□□□□ -1.71
UBP3Q01477 MRM2YGL136C 963 nt4.4□□□□□ -1.71
UBP3Q01477 YGR121W-AYGR121W-A 216 nt4.4□□□□□ -1.71
UBP3Q01477 PXR1YGR280C 816 nt4.4□□□□□ -1.71
UBP3Q01477 SPC1YJR010C-A 285 nt4.4□□□□□ -1.71
UBP3Q01477 RNH203YLR154C 333 nt4.4□□□□□ -1.71
UBP3Q01477 BSC3YLR465C 309 nt4.4□□□□□ -1.71
UBP3Q01477 YMR141CYMR141C 309 nt4.4□□□□□ -1.71
UBP3Q01477 SIW14YNL032W 846 nt4.4□□□□□ -1.71
UBP3Q01477 REB1YBR049C 2433 nt4.4□□□□□ -1.71
UBP3Q01477 TCO89YPL180W 2400 nt4.4□□□□□ -1.71
UBP3Q01477 OST1YJL002C 1431 nt4.39□□□□□ -1.71
UBP3Q01477 TMA17YDL110C 453 nt4.39□□□□□ -1.71 RIP-Chip
UBP3Q01477 LIF1YGL090W 1266 nt4.39□□□□□ -1.71 RIP-Chip
UBP3Q01477 ABM1YJR108W 372 nt4.39□□□□□ -1.71
UBP3Q01477 RPL14AYKL006W 417 nt4.39□□□□□ -1.71
UBP3Q01477 AFB1YLR040C 675 nt4.39□□□□□ -1.71 RIP-Chip
UBP3Q01477 PAI3YMR174C 207 nt4.39□□□□□ -1.71
UBP3Q01477 YOR392WYOR392W 444 nt4.39□□□□□ -1.71
UBP3Q01477 YPK9YOR291W 4419 nt4.39□□□□□ -1.71
UBP3Q01477 LST4YKL176C 2487 nt4.38□□□□□ -1.71
UBP3Q01477 SPC105YGL093W 2754 nt4.38□□□□□ -1.71 RIP-Chip
UBP3Q01477 SEG1YMR086W 2883 nt4.38□□□□□ -1.71
UBP3Q01477 HNT1YDL125C 477 nt4.38□□□□□ -1.71
UBP3Q01477 YDR149CYDR149C 708 nt4.38□□□□□ -1.71
UBP3Q01477 ERV1YGR029W 570 nt4.38□□□□□ -1.71
Retrieved 100 of 7,029 protein–RNA pairs in 9.5 ms