Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NKX6-1P78426 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.35■□□□□ 0.53
NKX6-1P78426 AC233723.2-201ENST00000623798 2106 ntBASIC18.35■□□□□ 0.53
NKX6-1P78426 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NKX6-1P78426 AC242852.2-201ENST00000615738 1807 ntBASIC18.35■□□□□ 0.53
NKX6-1P78426 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NKX6-1P78426 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NKX6-1P78426 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.35■□□□□ 0.53
NKX6-1P78426 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NKX6-1P78426 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NKX6-1P78426 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NKX6-1P78426 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.35■□□□□ 0.53
NKX6-1P78426 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NKX6-1P78426 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NKX6-1P78426 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NKX6-1P78426 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NKX6-1P78426 GUSBP6-202ENST00000438529 1198 ntBASIC18.35■□□□□ 0.53
NKX6-1P78426 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.35■□□□□ 0.53
NKX6-1P78426 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.35■□□□□ 0.53
NKX6-1P78426 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NKX6-1P78426 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.35■□□□□ 0.53
NKX6-1P78426 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.35■□□□□ 0.53
NKX6-1P78426 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NKX6-1P78426 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.35■□□□□ 0.53
NKX6-1P78426 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
NKX6-1P78426 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
NKX6-1P78426 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NKX6-1P78426 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NKX6-1P78426 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NKX6-1P78426 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
NKX6-1P78426 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NKX6-1P78426 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NKX6-1P78426 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NKX6-1P78426 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.34■□□□□ 0.53
NKX6-1P78426 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.34■□□□□ 0.53
NKX6-1P78426 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.34■□□□□ 0.53
NKX6-1P78426 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NKX6-1P78426 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.34■□□□□ 0.53
NKX6-1P78426 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.34■□□□□ 0.53
NKX6-1P78426 AC133041.1-202ENST00000642053 222 ntBASIC18.34■□□□□ 0.53
NKX6-1P78426 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NKX6-1P78426 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.34■□□□□ 0.53
NKX6-1P78426 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.34■□□□□ 0.53
NKX6-1P78426 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
NKX6-1P78426 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.34■□□□□ 0.53
NKX6-1P78426 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NKX6-1P78426 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NKX6-1P78426 GUSBP5-202ENST00000510805 1989 ntBASIC18.33■□□□□ 0.53
NKX6-1P78426 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
NKX6-1P78426 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.33■□□□□ 0.53
NKX6-1P78426 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
NKX6-1P78426 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
NKX6-1P78426 AC069152.1-201ENST00000438030 544 ntBASIC18.33■□□□□ 0.52
NKX6-1P78426 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.33■□□□□ 0.52
NKX6-1P78426 AC093827.2-201ENST00000512654 315 ntBASIC18.33■□□□□ 0.52
NKX6-1P78426 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.33■□□□□ 0.52
NKX6-1P78426 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
NKX6-1P78426 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NKX6-1P78426 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NKX6-1P78426 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.33■□□□□ 0.52
NKX6-1P78426 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NKX6-1P78426 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NKX6-1P78426 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NKX6-1P78426 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
NKX6-1P78426 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.33■□□□□ 0.52
NKX6-1P78426 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NKX6-1P78426 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NKX6-1P78426 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NKX6-1P78426 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
NKX6-1P78426 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.32■□□□□ 0.52
NKX6-1P78426 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NKX6-1P78426 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
NKX6-1P78426 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NKX6-1P78426 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.32■□□□□ 0.52
NKX6-1P78426 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NKX6-1P78426 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.32■□□□□ 0.52
NKX6-1P78426 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NKX6-1P78426 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.32■□□□□ 0.52
NKX6-1P78426 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.32■□□□□ 0.52
NKX6-1P78426 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.32■□□□□ 0.52
NKX6-1P78426 EEF1DP3-203ENST00000566025 782 ntBASIC18.32■□□□□ 0.52
NKX6-1P78426 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NKX6-1P78426 UBE2DNL-204ENST00000602536 740 ntBASIC18.32■□□□□ 0.52
NKX6-1P78426 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NKX6-1P78426 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.32■□□□□ 0.52
NKX6-1P78426 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NKX6-1P78426 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NKX6-1P78426 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NKX6-1P78426 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NKX6-1P78426 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
NKX6-1P78426 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NKX6-1P78426 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NKX6-1P78426 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
NKX6-1P78426 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NKX6-1P78426 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NKX6-1P78426 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NKX6-1P78426 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NKX6-1P78426 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NKX6-1P78426 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.31■□□□□ 0.52
NKX6-1P78426 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms