Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE2NP61088 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
UBE2NP61088 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE2NP61088 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE2NP61088 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.36■□□□□ 0.53
UBE2NP61088 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE2NP61088 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
UBE2NP61088 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE2NP61088 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE2NP61088 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE2NP61088 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE2NP61088 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE2NP61088 KRT16P2-201ENST00000414673 1423 ntBASIC18.36■□□□□ 0.53
UBE2NP61088 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBE2NP61088 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.36■□□□□ 0.53
UBE2NP61088 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE2NP61088 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.36■□□□□ 0.53
UBE2NP61088 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE2NP61088 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBE2NP61088 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.36■□□□□ 0.53
UBE2NP61088 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
UBE2NP61088 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE2NP61088 SLC7A5P2-201ENST00000553010 536 ntBASIC18.36■□□□□ 0.53
UBE2NP61088 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.36■□□□□ 0.53
UBE2NP61088 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
UBE2NP61088 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
UBE2NP61088 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE2NP61088 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.36■□□□□ 0.53
UBE2NP61088 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE2NP61088 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.36■□□□□ 0.53
UBE2NP61088 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE2NP61088 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBE2NP61088 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE2NP61088 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.35■□□□□ 0.53
UBE2NP61088 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE2NP61088 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
UBE2NP61088 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE2NP61088 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.35■□□□□ 0.53
UBE2NP61088 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE2NP61088 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBE2NP61088 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBE2NP61088 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.35■□□□□ 0.53
UBE2NP61088 AC061975.6-201ENST00000579045 1553 ntBASIC18.35■□□□□ 0.53
UBE2NP61088 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
UBE2NP61088 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBE2NP61088 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE2NP61088 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE2NP61088 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBE2NP61088 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
UBE2NP61088 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
UBE2NP61088 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.35■□□□□ 0.53
UBE2NP61088 AC011767.1-201ENST00000617410 1153 ntBASIC18.35■□□□□ 0.53
UBE2NP61088 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.35■□□□□ 0.53
UBE2NP61088 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
UBE2NP61088 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE2NP61088 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE2NP61088 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE2NP61088 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE2NP61088 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE2NP61088 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.35■□□□□ 0.53
UBE2NP61088 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
UBE2NP61088 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBE2NP61088 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.34■□□□□ 0.53
UBE2NP61088 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBE2NP61088 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBE2NP61088 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBE2NP61088 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBE2NP61088 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
UBE2NP61088 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.34■□□□□ 0.53
UBE2NP61088 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBE2NP61088 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.34■□□□□ 0.53
UBE2NP61088 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBE2NP61088 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.34■□□□□ 0.53
UBE2NP61088 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.34■□□□□ 0.53
UBE2NP61088 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.34■□□□□ 0.53
UBE2NP61088 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.34■□□□□ 0.53
UBE2NP61088 SLC7A5P1-201ENST00000568957 537 ntBASIC18.34■□□□□ 0.53
UBE2NP61088 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.34■□□□□ 0.53
UBE2NP61088 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBE2NP61088 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBE2NP61088 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.34■□□□□ 0.53
UBE2NP61088 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.34■□□□□ 0.53
UBE2NP61088 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBE2NP61088 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBE2NP61088 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBE2NP61088 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
UBE2NP61088 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.33■□□□□ 0.53
UBE2NP61088 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
UBE2NP61088 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.33■□□□□ 0.53
UBE2NP61088 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.33■□□□□ 0.53
UBE2NP61088 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
UBE2NP61088 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.33■□□□□ 0.53
UBE2NP61088 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
UBE2NP61088 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.33■□□□□ 0.52
UBE2NP61088 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
UBE2NP61088 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.33■□□□□ 0.52
UBE2NP61088 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.33■□□□□ 0.52
UBE2NP61088 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.33■□□□□ 0.52
UBE2NP61088 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
UBE2NP61088 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms