Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP1S2P56377 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
AP1S2P56377 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP1S2P56377 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
AP1S2P56377 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.34■□□□□ 0.85
AP1S2P56377 AP001160.3-201ENST00000601484 763 ntBASIC20.34■□□□□ 0.85
AP1S2P56377 MIR6821-201ENST00000617625 74 ntBASIC20.34■□□□□ 0.85
AP1S2P56377 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP1S2P56377 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP1S2P56377 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP1S2P56377 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP1S2P56377 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
AP1S2P56377 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.34■□□□□ 0.85
AP1S2P56377 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP1S2P56377 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP1S2P56377 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
AP1S2P56377 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.34■□□□□ 0.85
AP1S2P56377 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
AP1S2P56377 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
AP1S2P56377 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.33■□□□□ 0.85
AP1S2P56377 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.33■□□□□ 0.85
AP1S2P56377 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.33■□□□□ 0.85
AP1S2P56377 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
AP1S2P56377 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
AP1S2P56377 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
AP1S2P56377 KRT18P20-201ENST00000548986 1279 ntBASIC20.33■□□□□ 0.85
AP1S2P56377 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.33■□□□□ 0.85
AP1S2P56377 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
AP1S2P56377 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
AP1S2P56377 AC004854.2-201ENST00000608450 1441 ntBASIC20.33■□□□□ 0.84
AP1S2P56377 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
AP1S2P56377 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
AP1S2P56377 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
AP1S2P56377 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
AP1S2P56377 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
AP1S2P56377 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
AP1S2P56377 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
AP1S2P56377 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.32■□□□□ 0.84
AP1S2P56377 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
AP1S2P56377 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
AP1S2P56377 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
AP1S2P56377 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
AP1S2P56377 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
AP1S2P56377 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
AP1S2P56377 AC034268.1-201ENST00000441047 882 ntBASIC20.32■□□□□ 0.84
AP1S2P56377 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
AP1S2P56377 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.32■□□□□ 0.84
AP1S2P56377 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
AP1S2P56377 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
AP1S2P56377 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
AP1S2P56377 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
AP1S2P56377 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
AP1S2P56377 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
AP1S2P56377 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.32■□□□□ 0.84
AP1S2P56377 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
AP1S2P56377 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
AP1S2P56377 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
AP1S2P56377 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
AP1S2P56377 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.31■□□□□ 0.84
AP1S2P56377 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.31■□□□□ 0.84
AP1S2P56377 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
AP1S2P56377 KRT19P1-201ENST00000405746 1186 ntBASIC20.31■□□□□ 0.84
AP1S2P56377 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.31■□□□□ 0.84
AP1S2P56377 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.31■□□□□ 0.84
AP1S2P56377 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
AP1S2P56377 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
AP1S2P56377 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
AP1S2P56377 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
AP1S2P56377 AC019069.1-201ENST00000610008 1333 ntBASIC20.3■□□□□ 0.84
AP1S2P56377 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
AP1S2P56377 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.3■□□□□ 0.84
AP1S2P56377 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
AP1S2P56377 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
AP1S2P56377 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
AP1S2P56377 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
AP1S2P56377 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
AP1S2P56377 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.3■□□□□ 0.84
AP1S2P56377 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
AP1S2P56377 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.3■□□□□ 0.84
AP1S2P56377 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.3■□□□□ 0.84
AP1S2P56377 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.3■□□□□ 0.84
AP1S2P56377 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.3■□□□□ 0.84
AP1S2P56377 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.3■□□□□ 0.84
AP1S2P56377 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
AP1S2P56377 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
AP1S2P56377 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.3■□□□□ 0.84
AP1S2P56377 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
AP1S2P56377 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
AP1S2P56377 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
AP1S2P56377 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.29■□□□□ 0.84
AP1S2P56377 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
AP1S2P56377 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
AP1S2P56377 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
AP1S2P56377 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
AP1S2P56377 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
AP1S2P56377 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
AP1S2P56377 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
AP1S2P56377 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
AP1S2P56377 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
AP1S2P56377 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms