Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 PIB1YDR313C 861 nt2.32□□□□□ -2.04
SSU72P53538 YDR491CYDR491C 492 nt2.32□□□□□ -2.04
SSU72P53538 AST2YER101C 1293 nt2.32□□□□□ -2.04
SSU72P53538 YGL117WYGL117W 798 nt2.32□□□□□ -2.04
SSU72P53538 YGL159WYGL159W 1113 nt2.32□□□□□ -2.04
SSU72P53538 RGI2YIL057C 495 nt2.32□□□□□ -2.04
SSU72P53538 GPN3YLR243W 819 nt2.32□□□□□ -2.04
SSU72P53538 CWC24YLR323C 780 nt2.32□□□□□ -2.04
SSU72P53538 DIA1YMR316W 1011 nt2.32□□□□□ -2.04
SSU72P53538 YBL062WYBL062W 381 nt2.32□□□□□ -2.04
SSU72P53538 COQ10YOL008W 624 nt2.32□□□□□ -2.04
SSU72P53538 DCP1YOL149W 696 nt2.32□□□□□ -2.04
SSU72P53538 GRX7YBR014C 612 nt2.32□□□□□ -2.04
SSU72P53538 TYE7YOR344C 876 nt2.32□□□□□ -2.04
SSU72P53538 YME2YMR302C 2553 nt2.32□□□□□ -2.04
SSU72P53538 TCB2YNL087W 3537 nt2.31□□□□□ -2.04
SSU72P53538 BCK1YJL095W 4437 nt2.31□□□□□ -2.04
SSU72P53538 GCV2YMR189W 3105 nt2.31□□□□□ -2.04
SSU72P53538 PSP1YDR505C 2526 nt2.31□□□□□ -2.04
SSU72P53538 KHA1YJL094C 2622 nt2.31□□□□□ -2.04
SSU72P53538 GCD2YGR083C 1956 nt2.31□□□□□ -2.04
SSU72P53538 PET100YDR079W 336 nt2.31□□□□□ -2.04
SSU72P53538 YEL010WYEL010W 351 nt2.31□□□□□ -2.04
SSU72P53538 RRT13YER066W 558 nt2.31□□□□□ -2.04
SSU72P53538 MPS2YGL075C 1164 nt2.31□□□□□ -2.04
SSU72P53538 MCR1YKL150W 909 nt2.31□□□□□ -2.04
SSU72P53538 SDO1YLR022C 753 nt2.31□□□□□ -2.04
SSU72P53538 CDC123YLR215C 1083 nt2.31□□□□□ -2.04
SSU72P53538 NEJ1YLR265C 1029 nt2.31□□□□□ -2.04
SSU72P53538 YMR087WYMR087W 855 nt2.31□□□□□ -2.04
SSU72P53538 YOR385WYOR385W 873 nt2.31□□□□□ -2.04
SSU72P53538 DSF2YBR007C 2211 nt2.31□□□□□ -2.04
SSU72P53538 VPS9YML097C 1356 nt2.31□□□□□ -2.04
SSU72P53538 GCD10YNL062C 1437 nt2.31□□□□□ -2.04
SSU72P53538 SEN54YPL083C 1404 nt2.31□□□□□ -2.04
SSU72P53538 UBP15YMR304W 3693 nt2.31□□□□□ -2.04
SSU72P53538 tF(GAA)DtF(GAA)D 73 nt2.3□□□□□ -2.04
SSU72P53538 tF(GAA)NtF(GAA)N 73 nt2.3□□□□□ -2.04
SSU72P53538 RPL23BYER117W 414 nt2.3□□□□□ -2.04
SSU72P53538 YFR010W-AYFR010W-A 189 nt2.3□□□□□ -2.04
SSU72P53538 YGL204CYGL204C 306 nt2.3□□□□□ -2.04
SSU72P53538 PEF1YGR058W 1008 nt2.3□□□□□ -2.04
SSU72P53538 RPL24BYGR148C 468 nt2.3□□□□□ -2.04
SSU72P53538 PET191YJR034W 327 nt2.3□□□□□ -2.04
SSU72P53538 POL32YJR043C 1053 nt2.3□□□□□ -2.04
SSU72P53538 CMC1YKL137W 336 nt2.3□□□□□ -2.04
SSU72P53538 YLR285C-AYLR285C-A 171 nt2.3□□□□□ -2.04
SSU72P53538 NNT1YLR285W 786 nt2.3□□□□□ -2.04
SSU72P53538 PEX15YOL044W 1152 nt2.3□□□□□ -2.04
SSU72P53538 ANR2YKL047W 1551 nt2.3□□□□□ -2.04
SSU72P53538 SLS1YLR139C 1932 nt2.3□□□□□ -2.04
SSU72P53538 SWA2YDR320C 2007 nt2.3□□□□□ -2.04
SSU72P53538 YPL216WYPL216W 3309 nt2.3□□□□□ -2.04
SSU72P53538 SLY41YOR307C 1362 nt2.29□□□□□ -2.04
SSU72P53538 BRR6YGL247W 594 nt2.29□□□□□ -2.04
SSU72P53538 COG2YGR120C 789 nt2.29□□□□□ -2.04
SSU72P53538 YIL174WYIL174W 228 nt2.29□□□□□ -2.04
SSU72P53538 YJL222W-AYJL222W-A 228 nt2.29□□□□□ -2.04
SSU72P53538 CCE1YKL011C 1062 nt2.29□□□□□ -2.04
SSU72P53538 YLR297WYLR297W 390 nt2.29□□□□□ -2.04
SSU72P53538 YLR347W-AYLR347W-A 141 nt2.29□□□□□ -2.04
SSU72P53538 BET5YML077W 480 nt2.29□□□□□ -2.04
SSU72P53538 DLT1YMR126C 1029 nt2.29□□□□□ -2.04
SSU72P53538 KTI11YBL071W-A 249 nt2.29□□□□□ -2.04
SSU72P53538 YSF3YNL138W-A 258 nt2.29□□□□□ -2.04
SSU72P53538 AMS1YGL156W 3252 nt2.29□□□□□ -2.04
SSU72P53538 ATP22YDR350C 2055 nt2.29□□□□□ -2.04
SSU72P53538 YEF3YLR249W 3135 nt2.28□□□□□ -2.04
SSU72P53538 AI4Q0065 1671 nt2.28□□□□□ -2.04
SSU72P53538 YGR067CYGR067C 2415 nt2.28□□□□□ -2.04
SSU72P53538 MAK5YBR142W 2322 nt2.28□□□□□ -2.04
SSU72P53538 YFH1YDL120W 525 nt2.28□□□□□ -2.04
SSU72P53538 YDR320W-BYDR320W-B 138 nt2.28□□□□□ -2.04
SSU72P53538 GEP7YGL057C 864 nt2.28□□□□□ -2.04
SSU72P53538 YGR121W-AYGR121W-A 216 nt2.28□□□□□ -2.04
SSU72P53538 YKL165C-AYKL165C-A 234 nt2.28□□□□□ -2.04
SSU72P53538 NMA111YNL123W 2994 nt2.28□□□□□ -2.04
SSU72P53538 MSB2YGR014W 3921 nt2.27□□□□□ -2.05
SSU72P53538 SCY1YGL083W 2415 nt2.27□□□□□ -2.05
SSU72P53538 DPP1YDR284C 870 nt2.27□□□□□ -2.05
SSU72P53538 TIM11YDR322C-A 291 nt2.27□□□□□ -2.05
SSU72P53538 YER079C-AYER079C-A 339 nt2.27□□□□□ -2.05
SSU72P53538 RPL22BYFL034C-A 369 nt2.27□□□□□ -2.05
SSU72P53538 YHR182C-AYHR182C-A 474 nt2.27□□□□□ -2.05
SSU72P53538 RFA3YJL173C 369 nt2.27□□□□□ -2.05
SSU72P53538 YKL131WYKL131W 522 nt2.27□□□□□ -2.05
SSU72P53538 YAL064WYAL064W 285 nt2.27□□□□□ -2.05
SSU72P53538 YMR158C-AYMR158C-A 138 nt2.27□□□□□ -2.05
SSU72P53538 MIC27YNL100W 705 nt2.27□□□□□ -2.05
SSU72P53538 ATG3YNR007C 933 nt2.27□□□□□ -2.05
SSU72P53538 YOL114CYOL114C 609 nt2.27□□□□□ -2.05
SSU72P53538 YOR203WYOR203W 354 nt2.27□□□□□ -2.05
SSU72P53538 TOF1YNL273W 3717 nt2.27□□□□□ -2.05
SSU72P53538 SWR1YDR334W 4545 nt2.27□□□□□ -2.05
SSU72P53538 RPO41YFL036W 4056 nt2.27□□□□□ -2.05
SSU72P53538 YBL005W-BYBL005W-B 5268 nt2.26□□□□□ -2.05
SSU72P53538 STN1YDR082W 1485 nt2.26□□□□□ -2.05
SSU72P53538 RTG3YBL103C 1461 nt2.26□□□□□ -2.05
SSU72P53538 RPN9YDR427W 1182 nt2.26□□□□□ -2.05
SSU72P53538 ERP6YGL002W 651 nt2.26□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 11.7 ms