Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF144AP50876 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.37■□□□□ 0.69
RNF144AP50876 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RNF144AP50876 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF144AP50876 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF144AP50876 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RNF144AP50876 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF144AP50876 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.37■□□□□ 0.69
RNF144AP50876 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.37■□□□□ 0.69
RNF144AP50876 CCDC92B-201ENST00000575506 885 ntBASIC19.37■□□□□ 0.69
RNF144AP50876 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.37■□□□□ 0.69
RNF144AP50876 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF144AP50876 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.37■□□□□ 0.69
RNF144AP50876 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF144AP50876 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.36■□□□□ 0.69
RNF144AP50876 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
RNF144AP50876 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF144AP50876 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RNF144AP50876 LINC02228-203ENST00000641970 1355 ntBASIC19.36■□□□□ 0.69
RNF144AP50876 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.36■□□□□ 0.69
RNF144AP50876 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF144AP50876 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RNF144AP50876 YBX1P1-201ENST00000445822 960 ntBASIC19.36■□□□□ 0.69
RNF144AP50876 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.36■□□□□ 0.69
RNF144AP50876 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF144AP50876 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RNF144AP50876 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF144AP50876 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.36■□□□□ 0.69
RNF144AP50876 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RNF144AP50876 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF144AP50876 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF144AP50876 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF144AP50876 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF144AP50876 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF144AP50876 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF144AP50876 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF144AP50876 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RNF144AP50876 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RNF144AP50876 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF144AP50876 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF144AP50876 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF144AP50876 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF144AP50876 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF144AP50876 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF144AP50876 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RNF144AP50876 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF144AP50876 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.35■□□□□ 0.69
RNF144AP50876 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF144AP50876 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF144AP50876 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF144AP50876 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF144AP50876 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF144AP50876 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF144AP50876 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.35■□□□□ 0.69
RNF144AP50876 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RNF144AP50876 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF144AP50876 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF144AP50876 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF144AP50876 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF144AP50876 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RNF144AP50876 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RNF144AP50876 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF144AP50876 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF144AP50876 AC061975.6-201ENST00000579045 1553 ntBASIC19.34■□□□□ 0.69
RNF144AP50876 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF144AP50876 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF144AP50876 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
RNF144AP50876 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF144AP50876 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RNF144AP50876 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF144AP50876 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RNF144AP50876 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
RNF144AP50876 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
RNF144AP50876 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.33■□□□□ 0.69
RNF144AP50876 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF144AP50876 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.33■□□□□ 0.69
RNF144AP50876 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
RNF144AP50876 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RNF144AP50876 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RNF144AP50876 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.33■□□□□ 0.68
RNF144AP50876 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF144AP50876 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.33■□□□□ 0.68
RNF144AP50876 KRT18P14-201ENST00000534205 1250 ntBASIC19.33■□□□□ 0.68
RNF144AP50876 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF144AP50876 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RNF144AP50876 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF144AP50876 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF144AP50876 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RNF144AP50876 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF144AP50876 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF144AP50876 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RNF144AP50876 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF144AP50876 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF144AP50876 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF144AP50876 AC019069.1-201ENST00000610008 1333 ntBASIC19.32■□□□□ 0.68
RNF144AP50876 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.32■□□□□ 0.68
RNF144AP50876 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF144AP50876 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF144AP50876 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.32■□□□□ 0.68
RNF144AP50876 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms