Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 YLR422WYLR422W 5799 nt2.1□□□□□ -2.07
TY1B-JR1P47098 USO1YDL058W 5373 nt2.1□□□□□ -2.07
TY1B-JR1P47098 YCR099CYCR099C 468 nt2.1□□□□□ -2.07
TY1B-JR1P47098 RNR4YGR180C 1038 nt2.1□□□□□ -2.07
TY1B-JR1P47098 NRG2YBR066C 663 nt2.1□□□□□ -2.07
TY1B-JR1P47098 AGE1YDR524C 1449 nt2.1□□□□□ -2.07
TY1B-JR1P47098 VPS3YDR495C 3036 nt2.09□□□□□ -2.07
TY1B-JR1P47098 CTK2YJL006C 972 nt2.09□□□□□ -2.07
TY1B-JR1P47098 YKL165C-AYKL165C-A 234 nt2.09□□□□□ -2.07
TY1B-JR1P47098 HOS4YIL112W 3252 nt2.08□□□□□ -2.08
TY1B-JR1P47098 EAF5YEL018W 840 nt2.08□□□□□ -2.08
TY1B-JR1P47098 YOR032W-AYOR032W-A 201 nt2.08□□□□□ -2.08
TY1B-JR1P47098 ISF1YMR081C 1017 nt2.08□□□□□ -2.08
TY1B-JR1P47098 OSW5YMR148W 447 nt2.08□□□□□ -2.08
TY1B-JR1P47098 SYH1YPL105C 2550 nt2.07□□□□□ -2.08
TY1B-JR1P47098 DOP1YDR141C 5097 nt2.07□□□□□ -2.08
TY1B-JR1P47098 ART10YLR392C 1557 nt2.07□□□□□ -2.08
TY1B-JR1P47098 ERP3YDL018C 678 nt2.07□□□□□ -2.08
TY1B-JR1P47098 HPA3YEL066W 540 nt2.07□□□□□ -2.08
TY1B-JR1P47098 ALB1YJL122W 528 nt2.07□□□□□ -2.08
TY1B-JR1P47098 HRI1YLR301W 735 nt2.07□□□□□ -2.08
TY1B-JR1P47098 IBA57YJR122W 1494 nt2.07□□□□□ -2.08
TY1B-JR1P47098 YHR214C-BYHR214C-B 5382 nt2.07□□□□□ -2.08
TY1B-JR1P47098 PEX5YDR244W 1839 nt2.06□□□□□ -2.08
TY1B-JR1P47098 SCP1YOR367W 603 nt2.06□□□□□ -2.08
TY1B-JR1P47098 SEC3YER008C 4011 nt2.05□□□□□ -2.08
TY1B-JR1P47098 RPS18AYDR450W 441 nt2.05□□□□□ -2.08
TY1B-JR1P47098 YBL073WYBL073W 312 nt2.05□□□□□ -2.08
TY1B-JR1P47098 TAF14YPL129W 735 nt2.05□□□□□ -2.08
TY1B-JR1P47098 YGR109W-BYGR109W-B 4644 nt2.05□□□□□ -2.08
TY1B-JR1P47098 CCM1YGR150C 2595 nt2.05□□□□□ -2.08
TY1B-JR1P47098 VPS54YDR027C 2670 nt2.05□□□□□ -2.08
TY1B-JR1P47098 RIC1YLR039C 3171 nt2.05□□□□□ -2.08
TY1B-JR1P47098 MRP10YDL045W-A 288 nt2.05□□□□□ -2.08
TY1B-JR1P47098 SNL1YIL016W 480 nt2.05□□□□□ -2.08
TY1B-JR1P47098 UBX3YDL091C 1368 nt2.04□□□□□ -2.08
TY1B-JR1P47098 MIG1YGL035C 1515 nt2.04□□□□□ -2.08
TY1B-JR1P47098 YIL142C-AYIL142C-A 333 nt2.04□□□□□ -2.08
TY1B-JR1P47098 ERG29YMR134W 714 nt2.04□□□□□ -2.08
TY1B-JR1P47098 RPB11YOL005C 363 nt2.04□□□□□ -2.08
TY1B-JR1P47098 CNS1YBR155W 1158 nt2.04□□□□□ -2.08
TY1B-JR1P47098 YDL199CYDL199C 2064 nt2.04□□□□□ -2.08
TY1B-JR1P47098 TPO5YKL174C 1857 nt2.04□□□□□ -2.08
TY1B-JR1P47098 YPR097WYPR097W 3222 nt2.03□□□□□ -2.08
TY1B-JR1P47098 LHS1YKL073W 2646 nt2.03□□□□□ -2.08
TY1B-JR1P47098 RPL20AYMR242C 519 nt2.03□□□□□ -2.09
TY1B-JR1P47098 INA17YPL099C 549 nt2.03□□□□□ -2.09
TY1B-JR1P47098 YGR111WYGR111W 1203 nt2.02□□□□□ -2.09
TY1B-JR1P47098 RRP14YKL082C 1305 nt2.02□□□□□ -2.09
TY1B-JR1P47098 MLP2YIL149C 5040 nt2.01□□□□□ -2.09
TY1B-JR1P47098 PLC1YPL268W 2610 nt2.01□□□□□ -2.09
TY1B-JR1P47098 SNF11YDR073W 510 nt2.01□□□□□ -2.09
TY1B-JR1P47098 ARR2YPR200C 393 nt2.01□□□□□ -2.09
TY1B-JR1P47098 KXD1YGL079W 657 nt2□□□□□ -2.09
TY1B-JR1P47098 COG2YGR120C 789 nt2□□□□□ -2.09
TY1B-JR1P47098 INA22YIR024C 651 nt2□□□□□ -2.09
TY1B-JR1P47098 MTR2YKL186C 555 nt2□□□□□ -2.09
TY1B-JR1P47098 ERP1YAR002C-A 660 nt2□□□□□ -2.09
TY1B-JR1P47098 COS3YML132W 1140 nt2□□□□□ -2.09
TY1B-JR1P47098 COS2YBR302C 1140 nt2□□□□□ -2.09
TY1B-JR1P47098 SHE9YDR393W 1371 nt2□□□□□ -2.09
TY1B-JR1P47098 TOM70YNL121C 1854 nt2□□□□□ -2.09
TY1B-JR1P47098 YIR014WYIR014W 729 nt2□□□□□ -2.09
TY1B-JR1P47098 MPD2YOL088C 834 nt2□□□□□ -2.09
TY1B-JR1P47098 YOR289WYOR289W 756 nt2□□□□□ -2.09
TY1B-JR1P47098 SLM1YIL105C 2061 nt2□□□□□ -2.09
TY1B-JR1P47098 UTP5YDR398W 1932 nt1.99□□□□□ -2.09
TY1B-JR1P47098 FMP48YGR052W 1110 nt1.99□□□□□ -2.09
TY1B-JR1P47098 YHI9YHR029C 885 nt1.99□□□□□ -2.09
TY1B-JR1P47098 YHR180W-AYHR180W-A 183 nt1.99□□□□□ -2.09
TY1B-JR1P47098 TSR4YOL022C 1227 nt1.99□□□□□ -2.09
TY1B-JR1P47098 POL5YEL055C 3069 nt1.99□□□□□ -2.09
TY1B-JR1P47098 MDM32YOR147W 1869 nt1.99□□□□□ -2.09
TY1B-JR1P47098 UFD2YDL190C 2886 nt1.98□□□□□ -2.09
TY1B-JR1P47098 SPC98YNL126W 2541 nt1.98□□□□□ -2.09
TY1B-JR1P47098 YBR196C-BYBR196C-B 105 nt1.98□□□□□ -2.09
TY1B-JR1P47098 AGC1YPR021C 2709 nt1.98□□□□□ -2.09
TY1B-JR1P47098 SRD1YCR018C 666 nt1.98□□□□□ -2.09
TY1B-JR1P47098 YDR169C-AYDR169C-A 150 nt1.98□□□□□ -2.09
TY1B-JR1P47098 YLR154W-AYLR154W-A 186 nt1.98□□□□□ -2.09
TY1B-JR1P47098 YLR224WYLR224W 1110 nt1.98□□□□□ -2.09
TY1B-JR1P47098 UTP13YLR222C 2454 nt1.97□□□□□ -2.09
TY1B-JR1P47098 CSE4YKL049C 690 nt1.97□□□□□ -2.09
TY1B-JR1P47098 REV1YOR346W 2958 nt1.96□□□□□ -2.1
TY1B-JR1P47098 UTP20YBL004W 7482 nt1.96□□□□□ -2.1
TY1B-JR1P47098 YLR345WYLR345W 1530 nt1.96□□□□□ -2.1
TY1B-JR1P47098 CTH1YDR151C 978 nt1.95□□□□□ -2.1
TY1B-JR1P47098 GRX3YDR098C 858 nt1.95□□□□□ -2.1
TY1B-JR1P47098 SNO3YFL060C 669 nt1.95□□□□□ -2.1
TY1B-JR1P47098 tQ(UUG)E2tQ(UUG)E2 72 nt1.95□□□□□ -2.1
TY1B-JR1P47098 SEN15YMR059W 387 nt1.95□□□□□ -2.1
TY1B-JR1P47098 SNO2YNL334C 669 nt1.95□□□□□ -2.1
TY1B-JR1P47098 YDR034C-DYDR034C-D 5313 nt1.94□□□□□ -2.1
TY1B-JR1P47098 YLR410W-BYLR410W-B 5313 nt1.94□□□□□ -2.1
TY1B-JR1P47098 DAS2YDR020C 699 nt1.94□□□□□ -2.1
TY1B-JR1P47098 tF(GAA)BtF(GAA)B 73 nt1.94□□□□□ -2.1
TY1B-JR1P47098 tF(GAA)FtF(GAA)F 73 nt1.94□□□□□ -2.1
TY1B-JR1P47098 tF(GAA)GtF(GAA)G 73 nt1.94□□□□□ -2.1
TY1B-JR1P47098 tF(GAA)H1tF(GAA)H1 73 nt1.94□□□□□ -2.1
TY1B-JR1P47098 tF(GAA)H2tF(GAA)H2 73 nt1.94□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 17.8 ms