Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
NKX2-1P43699 PLK5-205ENST00000642079 1969 ntBASIC17.08■□□□□ 0.32
NKX2-1P43699 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-1P43699 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.07■□□□□ 0.32
NKX2-1P43699 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-1P43699 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.07■□□□□ 0.32
NKX2-1P43699 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-1P43699 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
NKX2-1P43699 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NKX2-1P43699 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NKX2-1P43699 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-1P43699 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NKX2-1P43699 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-1P43699 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.07■□□□□ 0.32
NKX2-1P43699 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
NKX2-1P43699 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NKX2-1P43699 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-1P43699 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-1P43699 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-1P43699 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-1P43699 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-1P43699 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NKX2-1P43699 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.07■□□□□ 0.32
NKX2-1P43699 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.07■□□□□ 0.32
NKX2-1P43699 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
NKX2-1P43699 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NKX2-1P43699 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NKX2-1P43699 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NKX2-1P43699 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.06■□□□□ 0.32
NKX2-1P43699 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NKX2-1P43699 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NKX2-1P43699 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.06■□□□□ 0.32
NKX2-1P43699 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NKX2-1P43699 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.06■□□□□ 0.32
NKX2-1P43699 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
NKX2-1P43699 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NKX2-1P43699 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NKX2-1P43699 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.06■□□□□ 0.32
NKX2-1P43699 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NKX2-1P43699 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.06■□□□□ 0.32
NKX2-1P43699 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NKX2-1P43699 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NKX2-1P43699 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
NKX2-1P43699 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.06■□□□□ 0.32
NKX2-1P43699 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NKX2-1P43699 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
NKX2-1P43699 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NKX2-1P43699 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NKX2-1P43699 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX2-1P43699 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX2-1P43699 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NKX2-1P43699 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX2-1P43699 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.05■□□□□ 0.32
NKX2-1P43699 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.05■□□□□ 0.32
NKX2-1P43699 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX2-1P43699 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
NKX2-1P43699 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NKX2-1P43699 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NKX2-1P43699 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX2-1P43699 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX2-1P43699 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.05■□□□□ 0.32
NKX2-1P43699 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.05■□□□□ 0.32
NKX2-1P43699 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX2-1P43699 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX2-1P43699 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX2-1P43699 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NKX2-1P43699 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX2-1P43699 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.04■□□□□ 0.32
NKX2-1P43699 AIRN-201ENST00000601203 4374 ntBASIC17.04■□□□□ 0.32
NKX2-1P43699 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NKX2-1P43699 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX2-1P43699 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
NKX2-1P43699 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX2-1P43699 AC010141.3-201ENST00000456659 717 ntBASIC17.04■□□□□ 0.32
NKX2-1P43699 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.04■□□□□ 0.32
NKX2-1P43699 pRNA.6-201ENST00000610482 90 ntBASIC17.04■□□□□ 0.32
NKX2-1P43699 pRNA.5-201ENST00000612139 90 ntBASIC17.04■□□□□ 0.32
NKX2-1P43699 pRNA.11-201ENST00000618423 90 ntBASIC17.04■□□□□ 0.32
NKX2-1P43699 pRNA.13-201ENST00000619112 90 ntBASIC17.04■□□□□ 0.32
NKX2-1P43699 AL117332.1-201ENST00000622628 974 ntBASIC17.04■□□□□ 0.32
NKX2-1P43699 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.04■□□□□ 0.32
NKX2-1P43699 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NKX2-1P43699 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX2-1P43699 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.04■□□□□ 0.32
NKX2-1P43699 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX2-1P43699 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX2-1P43699 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX2-1P43699 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX2-1P43699 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NKX2-1P43699 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NKX2-1P43699 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
NKX2-1P43699 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.04■□□□□ 0.32
NKX2-1P43699 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX2-1P43699 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NKX2-1P43699 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NKX2-1P43699 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.03■□□□□ 0.32
NKX2-1P43699 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
NKX2-1P43699 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NKX2-1P43699 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.03■□□□□ 0.32
NKX2-1P43699 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms