Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 YLL044WYLL044W 447 nt4.67□□□□□ -1.66
MSH4P40965 RRT16YNL105W 429 nt4.67□□□□□ -1.66
MSH4P40965 YBR076C-AYBR076C-A 267 nt4.67□□□□□ -1.66
MSH4P40965 SEC2YNL272C 2280 nt4.66□□□□□ -1.66
MSH4P40965 HSP30YCR021C 999 nt4.66□□□□□ -1.66
MSH4P40965 RPS18AYDR450W 441 nt4.66□□□□□ -1.66
MSH4P40965 GPP2YER062C 753 nt4.66□□□□□ -1.66
MSH4P40965 TDA2YER071C 381 nt4.66□□□□□ -1.66
MSH4P40965 YHR182C-AYHR182C-A 474 nt4.66□□□□□ -1.66
MSH4P40965 ROX1YPR065W 1107 nt4.66□□□□□ -1.66
MSH4P40965 BIK1YCL029C 1323 nt4.66□□□□□ -1.66
MSH4P40965 YBP2YGL060W 1926 nt4.66□□□□□ -1.66
MSH4P40965 AHA1YDR214W 1053 nt4.65□□□□□ -1.67
MSH4P40965 YDR340WYDR340W 303 nt4.65□□□□□ -1.67
MSH4P40965 YGR121W-AYGR121W-A 216 nt4.65□□□□□ -1.67
MSH4P40965 EPT1YHR123W 1176 nt4.65□□□□□ -1.67
MSH4P40965 YJL169WYJL169W 369 nt4.65□□□□□ -1.67
MSH4P40965 RPL14AYKL006W 417 nt4.65□□□□□ -1.67
MSH4P40965 YKL066WYKL066W 444 nt4.65□□□□□ -1.67
MSH4P40965 YKL162C-AYKL162C-A 153 nt4.65□□□□□ -1.67
MSH4P40965 YML116W-AYML116W-A 303 nt4.65□□□□□ -1.67
MSH4P40965 YMR141CYMR141C 309 nt4.65□□□□□ -1.67
MSH4P40965 YNL150WYNL150W 408 nt4.65□□□□□ -1.67
MSH4P40965 FRM2YCL026C-A 582 nt4.65□□□□□ -1.67
MSH4P40965 MNL1YHR204W 2391 nt4.65□□□□□ -1.67
MSH4P40965 KIN3YAR018C 1308 nt4.65□□□□□ -1.67
MSH4P40965 GAL80YML051W 1308 nt4.65□□□□□ -1.67
MSH4P40965 OSH2YDL019C 3852 nt4.65□□□□□ -1.67
MSH4P40965 UTP25YIL091C 2166 nt4.64□□□□□ -1.67
MSH4P40965 HNT1YDL125C 477 nt4.64□□□□□ -1.67
MSH4P40965 PMI40YER003C 1290 nt4.64□□□□□ -1.67
MSH4P40965 YER034WYER034W 558 nt4.64□□□□□ -1.67
MSH4P40965 YGL108CYGL108C 423 nt4.64□□□□□ -1.67
MSH4P40965 IGO2YHR132W-A 396 nt4.64□□□□□ -1.67
MSH4P40965 MAM33YIL070C 801 nt4.64□□□□□ -1.67
MSH4P40965 SPC1YJR010C-A 285 nt4.64□□□□□ -1.67
MSH4P40965 UTP30YKR060W 825 nt4.64□□□□□ -1.67
MSH4P40965 YML108WYML108W 318 nt4.64□□□□□ -1.67
MSH4P40965 YMR031W-AYMR031W-A 327 nt4.64□□□□□ -1.67
MSH4P40965 COQ10YOL008W 624 nt4.64□□□□□ -1.67
MSH4P40965 IDH2YOR136W 1110 nt4.64□□□□□ -1.67
MSH4P40965 USA1YML029W 2517 nt4.63□□□□□ -1.67
MSH4P40965 HMRA2YCR096C 360 nt4.63□□□□□ -1.67
MSH4P40965 SMB1YER029C 591 nt4.63□□□□□ -1.67
MSH4P40965 YKL044WYKL044W 321 nt4.63□□□□□ -1.67
MSH4P40965 CSE4YKL049C 690 nt4.63□□□□□ -1.67
MSH4P40965 RNH203YLR154C 333 nt4.63□□□□□ -1.67
MSH4P40965 PBA1YLR199C 831 nt4.63□□□□□ -1.67
MSH4P40965 RPL13BYMR142C 600 nt4.63□□□□□ -1.67
MSH4P40965 AIM4YBR194W 372 nt4.63□□□□□ -1.67
MSH4P40965 PTA1YAL043C 2358 nt4.63□□□□□ -1.67
MSH4P40965 EXO5YBR163W 1758 nt4.63□□□□□ -1.67
MSH4P40965 MSL5YLR116W 1431 nt4.63□□□□□ -1.67
MSH4P40965 SIN4YNL236W 2925 nt4.62□□□□□ -1.67
MSH4P40965 ADY4YLR227C 1482 nt4.62□□□□□ -1.67
MSH4P40965 HMG1YML075C 3165 nt4.62□□□□□ -1.67
MSH4P40965 YOL019WYOL019W 1656 nt4.62□□□□□ -1.67
MSH4P40965 YGR017WYGR017W 894 nt4.62□□□□□ -1.67
MSH4P40965 YIR020CYIR020C 303 nt4.62□□□□□ -1.67
MSH4P40965 ABM1YJR108W 372 nt4.62□□□□□ -1.67
MSH4P40965 DAD2YKR083C 402 nt4.62□□□□□ -1.67
MSH4P40965 CGI121YML036W 546 nt4.62□□□□□ -1.67
MSH4P40965 COQ5YML110C 924 nt4.62□□□□□ -1.67
MSH4P40965 YPR136CYPR136C 513 nt4.62□□□□□ -1.67
MSH4P40965 DER1YBR201W 636 nt4.62□□□□□ -1.67
MSH4P40965 SSH1YBR283C 1473 nt4.62□□□□□ -1.67
MSH4P40965 PGS1YCL004W 1566 nt4.61□□□□□ -1.67
MSH4P40965 YDL071CYDL071C 375 nt4.61□□□□□ -1.67
MSH4P40965 HOM2YDR158W 1098 nt4.61□□□□□ -1.67
MSH4P40965 SPC19YDR201W 498 nt4.61□□□□□ -1.67
MSH4P40965 IES6YEL044W 501 nt4.61□□□□□ -1.67
MSH4P40965 LIF1YGL090W 1266 nt4.61□□□□□ -1.67
MSH4P40965 AFB1YLR040C 675 nt4.61□□□□□ -1.67
MSH4P40965 PAI3YMR174C 207 nt4.61□□□□□ -1.67
MSH4P40965 SEC27YGL137W 2670 nt4.61□□□□□ -1.67
MSH4P40965 OAF3YKR064W 2592 nt4.6□□□□□ -1.67
MSH4P40965 TPA1YER049W 1935 nt4.6□□□□□ -1.67
MSH4P40965 PAM1YDR251W 2493 nt4.6□□□□□ -1.67
MSH4P40965 snR8snR8 190 nt4.6□□□□□ -1.67
MSH4P40965 YDR149CYDR149C 708 nt4.6□□□□□ -1.67
MSH4P40965 OTU1YFL044C 906 nt4.6□□□□□ -1.67
MSH4P40965 RPS0AYGR214W 759 nt4.6□□□□□ -1.67
MSH4P40965 GOS1YHL031C 672 nt4.6□□□□□ -1.67
MSH4P40965 YKL118WYKL118W 312 nt4.6□□□□□ -1.67
MSH4P40965 RPL18AYOL120C 561 nt4.6□□□□□ -1.67
MSH4P40965 YPL035CYPL035C 348 nt4.6□□□□□ -1.67
MSH4P40965 FYV5YCL058C 459 nt4.6□□□□□ -1.67
MSH4P40965 AEP1YMR064W 1557 nt4.6□□□□□ -1.67
MSH4P40965 FUS2YMR232W 2034 nt4.6□□□□□ -1.67
MSH4P40965 NAT1YDL040C 2565 nt4.59□□□□□ -1.67
MSH4P40965 YCR018C-AYCR018C-A 255 nt4.59□□□□□ -1.67
MSH4P40965 PIR1YKL164C 1026 nt4.59□□□□□ -1.67
MSH4P40965 RIO2YNL207W 1278 nt4.59□□□□□ -1.67
MSH4P40965 YBR225WYBR225W 2703 nt4.59□□□□□ -1.68
MSH4P40965 YDL199CYDL199C 2064 nt4.58□□□□□ -1.68
MSH4P40965 PRM15YMR278W 1869 nt4.58□□□□□ -1.68
MSH4P40965 STE24YJR117W 1362 nt4.58□□□□□ -1.68
MSH4P40965 YDL094CYDL094C 510 nt4.58□□□□□ -1.68
MSH4P40965 YDR115WYDR115W 318 nt4.58□□□□□ -1.68
MSH4P40965 SEC53YFL045C 765 nt4.58□□□□□ -1.68
Retrieved 100 of 7,029 protein–RNA pairs in 61.9 ms