Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTPN6P29350 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PTPN6P29350 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.83■□□□□ 0.77
PTPN6P29350 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.83■□□□□ 0.77
PTPN6P29350 AC105233.4-201ENST00000642045 216 ntBASIC19.83■□□□□ 0.77
PTPN6P29350 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PTPN6P29350 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.83■□□□□ 0.76
PTPN6P29350 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.83■□□□□ 0.76
PTPN6P29350 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PTPN6P29350 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.83■□□□□ 0.76
PTPN6P29350 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN6P29350 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN6P29350 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN6P29350 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN6P29350 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.82■□□□□ 0.76
PTPN6P29350 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN6P29350 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN6P29350 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN6P29350 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN6P29350 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.82■□□□□ 0.76
PTPN6P29350 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.82■□□□□ 0.76
PTPN6P29350 MIR6821-201ENST00000617625 74 ntBASIC19.82■□□□□ 0.76
PTPN6P29350 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.82■□□□□ 0.76
PTPN6P29350 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN6P29350 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN6P29350 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN6P29350 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN6P29350 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.82■□□□□ 0.76
PTPN6P29350 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN6P29350 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN6P29350 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
PTPN6P29350 AC006128.1-201ENST00000624704 1661 ntBASIC19.81■□□□□ 0.76
PTPN6P29350 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.81■□□□□ 0.76
PTPN6P29350 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.81■□□□□ 0.76
PTPN6P29350 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN6P29350 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.81■□□□□ 0.76
PTPN6P29350 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PTPN6P29350 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN6P29350 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN6P29350 AC027612.3-201ENST00000413684 1047 ntBASIC19.81■□□□□ 0.76
PTPN6P29350 AC097381.1-201ENST00000429019 1296 ntBASIC19.81■□□□□ 0.76
PTPN6P29350 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPN6P29350 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.81■□□□□ 0.76
PTPN6P29350 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN6P29350 MIR6084-201ENST00000622012 110 ntBASIC19.81■□□□□ 0.76
PTPN6P29350 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN6P29350 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN6P29350 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN6P29350 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
PTPN6P29350 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN6P29350 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN6P29350 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN6P29350 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN6P29350 AC092667.1-201ENST00000434301 2586 ntBASIC19.81■□□□□ 0.76
PTPN6P29350 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.81■□□□□ 0.76
PTPN6P29350 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN6P29350 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PTPN6P29350 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN6P29350 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.8■□□□□ 0.76
PTPN6P29350 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
PTPN6P29350 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN6P29350 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN6P29350 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN6P29350 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN6P29350 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN6P29350 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.8■□□□□ 0.76
PTPN6P29350 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN6P29350 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PTPN6P29350 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN6P29350 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.8■□□□□ 0.76
PTPN6P29350 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN6P29350 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.8■□□□□ 0.76
PTPN6P29350 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PTPN6P29350 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PTPN6P29350 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN6P29350 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN6P29350 AP005212.1-201ENST00000581547 1997 ntBASIC19.79■□□□□ 0.76
PTPN6P29350 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN6P29350 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.79■□□□□ 0.76
PTPN6P29350 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PTPN6P29350 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PTPN6P29350 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.79■□□□□ 0.76
PTPN6P29350 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.79■□□□□ 0.76
PTPN6P29350 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN6P29350 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.79■□□□□ 0.76
PTPN6P29350 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN6P29350 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PTPN6P29350 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN6P29350 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.79■□□□□ 0.76
PTPN6P29350 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN6P29350 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.78■□□□□ 0.76
PTPN6P29350 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
PTPN6P29350 AC009237.3-201ENST00000393279 1427 ntBASIC19.78■□□□□ 0.76
PTPN6P29350 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN6P29350 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN6P29350 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN6P29350 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN6P29350 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
PTPN6P29350 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PTPN6P29350 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms