Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.31■□□□□ 0.84
EPHA3P29320 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
EPHA3P29320 AL035685.1-201ENST00000636663 812 ntBASIC20.31■□□□□ 0.84
EPHA3P29320 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EPHA3P29320 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
EPHA3P29320 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
EPHA3P29320 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EPHA3P29320 AC027702.1-201ENST00000563810 1770 ntBASIC20.31■□□□□ 0.84
EPHA3P29320 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
EPHA3P29320 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EPHA3P29320 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.31■□□□□ 0.84
EPHA3P29320 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
EPHA3P29320 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
EPHA3P29320 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
EPHA3P29320 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
EPHA3P29320 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPHA3P29320 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPHA3P29320 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPHA3P29320 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
EPHA3P29320 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.3■□□□□ 0.84
EPHA3P29320 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
EPHA3P29320 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.3■□□□□ 0.84
EPHA3P29320 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.3■□□□□ 0.84
EPHA3P29320 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
EPHA3P29320 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
EPHA3P29320 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPHA3P29320 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
EPHA3P29320 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPHA3P29320 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPHA3P29320 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
EPHA3P29320 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
EPHA3P29320 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
EPHA3P29320 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EPHA3P29320 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.29■□□□□ 0.84
EPHA3P29320 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
EPHA3P29320 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
EPHA3P29320 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EPHA3P29320 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EPHA3P29320 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.29■□□□□ 0.84
EPHA3P29320 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.29■□□□□ 0.84
EPHA3P29320 AC121338.2-201ENST00000622535 1744 ntBASIC20.29■□□□□ 0.84
EPHA3P29320 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EPHA3P29320 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
EPHA3P29320 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.29■□□□□ 0.84
EPHA3P29320 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.29■□□□□ 0.84
EPHA3P29320 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.29■□□□□ 0.84
EPHA3P29320 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
EPHA3P29320 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EPHA3P29320 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EPHA3P29320 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EPHA3P29320 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
EPHA3P29320 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
EPHA3P29320 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.28■□□□□ 0.84
EPHA3P29320 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
EPHA3P29320 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.28■□□□□ 0.84
EPHA3P29320 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EPHA3P29320 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
EPHA3P29320 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
EPHA3P29320 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.28■□□□□ 0.84
EPHA3P29320 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EPHA3P29320 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
EPHA3P29320 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
EPHA3P29320 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EPHA3P29320 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EPHA3P29320 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.28■□□□□ 0.84
EPHA3P29320 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.28■□□□□ 0.84
EPHA3P29320 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
EPHA3P29320 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
EPHA3P29320 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EPHA3P29320 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
EPHA3P29320 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EPHA3P29320 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.27■□□□□ 0.84
EPHA3P29320 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
EPHA3P29320 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
EPHA3P29320 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.27■□□□□ 0.84
EPHA3P29320 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
EPHA3P29320 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.27■□□□□ 0.84
EPHA3P29320 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
EPHA3P29320 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.27■□□□□ 0.84
EPHA3P29320 AC011298.3-201ENST00000615796 283 ntBASIC20.27■□□□□ 0.84
EPHA3P29320 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EPHA3P29320 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.27■□□□□ 0.84
EPHA3P29320 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
EPHA3P29320 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
EPHA3P29320 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.26■□□□□ 0.83
EPHA3P29320 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EPHA3P29320 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
EPHA3P29320 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
EPHA3P29320 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.26■□□□□ 0.83
EPHA3P29320 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.26■□□□□ 0.83
EPHA3P29320 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EPHA3P29320 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.26■□□□□ 0.83
EPHA3P29320 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
EPHA3P29320 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EPHA3P29320 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
EPHA3P29320 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.26■□□□□ 0.83
EPHA3P29320 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
EPHA3P29320 DUX4L19-201ENST00000557448 1267 ntBASIC20.26■□□□□ 0.83
EPHA3P29320 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.26■□□□□ 0.83
EPHA3P29320 SMUG1P1-201ENST00000590640 811 ntBASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms