Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCND1P24385 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CCND1P24385 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CCND1P24385 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCND1P24385 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
CCND1P24385 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCND1P24385 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCND1P24385 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCND1P24385 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCND1P24385 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.93■□□□□ 0.94
CCND1P24385 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCND1P24385 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCND1P24385 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCND1P24385 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.92■□□□□ 0.94
CCND1P24385 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCND1P24385 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCND1P24385 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.92■□□□□ 0.94
CCND1P24385 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCND1P24385 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCND1P24385 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.92■□□□□ 0.94
CCND1P24385 MIR638-201ENST00000385237 100 ntBASIC20.92■□□□□ 0.94
CCND1P24385 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCND1P24385 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.92■□□□□ 0.94
CCND1P24385 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.92■□□□□ 0.94
CCND1P24385 AL034346.1-201ENST00000568244 1277 ntBASIC20.92■□□□□ 0.94
CCND1P24385 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCND1P24385 TSPY26P-201ENST00000476365 1326 ntBASIC20.92■□□□□ 0.94
CCND1P24385 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCND1P24385 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCND1P24385 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCND1P24385 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
CCND1P24385 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.92■□□□□ 0.94
CCND1P24385 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCND1P24385 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.92■□□□□ 0.94
CCND1P24385 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.92■□□□□ 0.94
CCND1P24385 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCND1P24385 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
CCND1P24385 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCND1P24385 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.91■□□□□ 0.94
CCND1P24385 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCND1P24385 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCND1P24385 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCND1P24385 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCND1P24385 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.91■□□□□ 0.94
CCND1P24385 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCND1P24385 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCND1P24385 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCND1P24385 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCND1P24385 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCND1P24385 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.91■□□□□ 0.94
CCND1P24385 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.91■□□□□ 0.94
CCND1P24385 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CCND1P24385 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCND1P24385 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCND1P24385 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCND1P24385 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CCND1P24385 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCND1P24385 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCND1P24385 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCND1P24385 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.9■□□□□ 0.94
CCND1P24385 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCND1P24385 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCND1P24385 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCND1P24385 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCND1P24385 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.9■□□□□ 0.94
CCND1P24385 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.9■□□□□ 0.94
CCND1P24385 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.9■□□□□ 0.94
CCND1P24385 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
CCND1P24385 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.89■□□□□ 0.94
CCND1P24385 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCND1P24385 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCND1P24385 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCND1P24385 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCND1P24385 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCND1P24385 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCND1P24385 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CCND1P24385 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCND1P24385 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CCND1P24385 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCND1P24385 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCND1P24385 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.89■□□□□ 0.93
CCND1P24385 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.89■□□□□ 0.93
CCND1P24385 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCND1P24385 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCND1P24385 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCND1P24385 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CCND1P24385 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCND1P24385 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCND1P24385 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCND1P24385 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.89■□□□□ 0.93
CCND1P24385 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.88■□□□□ 0.93
CCND1P24385 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CCND1P24385 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
CCND1P24385 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCND1P24385 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCND1P24385 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CCND1P24385 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.88■□□□□ 0.93
CCND1P24385 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.88■□□□□ 0.93
CCND1P24385 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCND1P24385 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms