Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.26■□□□□ 0.99
NFKB1P19838 AP004607.4-201ENST00000530158 1459 ntBASIC21.26■□□□□ 0.99
NFKB1P19838 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NFKB1P19838 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NFKB1P19838 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.25■□□□□ 0.99
NFKB1P19838 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.25■□□□□ 0.99
NFKB1P19838 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NFKB1P19838 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NFKB1P19838 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.25■□□□□ 0.99
NFKB1P19838 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
NFKB1P19838 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NFKB1P19838 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.25■□□□□ 0.99
NFKB1P19838 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.25■□□□□ 0.99
NFKB1P19838 AC010141.2-201ENST00000452426 721 ntBASIC21.25■□□□□ 0.99
NFKB1P19838 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NFKB1P19838 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.25■□□□□ 0.99
NFKB1P19838 DUX4L2-201ENST00000561772 1275 ntBASIC21.25■□□□□ 0.99
NFKB1P19838 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.25■□□□□ 0.99
NFKB1P19838 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.25■□□□□ 0.99
NFKB1P19838 DUX4L6-201ENST00000626483 1275 ntBASIC21.25■□□□□ 0.99
NFKB1P19838 DUX4L1-201ENST00000627662 1275 ntBASIC21.25■□□□□ 0.99
NFKB1P19838 DUX4L8-201ENST00000629013 1275 ntBASIC21.25■□□□□ 0.99
NFKB1P19838 DUX4L3-201ENST00000630187 1275 ntBASIC21.25■□□□□ 0.99
NFKB1P19838 DUX4L7-201ENST00000630678 1275 ntBASIC21.25■□□□□ 0.99
NFKB1P19838 DUX4L5-201ENST00000630834 1275 ntBASIC21.25■□□□□ 0.99
NFKB1P19838 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NFKB1P19838 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
NFKB1P19838 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
NFKB1P19838 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NFKB1P19838 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
NFKB1P19838 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.25■□□□□ 0.99
NFKB1P19838 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
NFKB1P19838 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.24■□□□□ 0.99
NFKB1P19838 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.24■□□□□ 0.99
NFKB1P19838 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.24■□□□□ 0.99
NFKB1P19838 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.24■□□□□ 0.99
NFKB1P19838 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.24■□□□□ 0.99
NFKB1P19838 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NFKB1P19838 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.24■□□□□ 0.99
NFKB1P19838 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NFKB1P19838 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NFKB1P19838 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
NFKB1P19838 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NFKB1P19838 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NFKB1P19838 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NFKB1P19838 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NFKB1P19838 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NFKB1P19838 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NFKB1P19838 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.23■□□□□ 0.99
NFKB1P19838 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.23■□□□□ 0.99
NFKB1P19838 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NFKB1P19838 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.23■□□□□ 0.99
NFKB1P19838 POU5F1P4-201ENST00000413175 1085 ntBASIC21.23■□□□□ 0.99
NFKB1P19838 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NFKB1P19838 KRT18P61-201ENST00000585825 1298 ntBASIC21.23■□□□□ 0.99
NFKB1P19838 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NFKB1P19838 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.23■□□□□ 0.99
NFKB1P19838 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NFKB1P19838 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NFKB1P19838 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NFKB1P19838 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
NFKB1P19838 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NFKB1P19838 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
NFKB1P19838 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NFKB1P19838 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NFKB1P19838 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.22■□□□□ 0.99
NFKB1P19838 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.22■□□□□ 0.99
NFKB1P19838 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.22■□□□□ 0.99
NFKB1P19838 AP001160.3-201ENST00000601484 763 ntBASIC21.22■□□□□ 0.99
NFKB1P19838 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.22■□□□□ 0.99
NFKB1P19838 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
NFKB1P19838 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.22■□□□□ 0.99
NFKB1P19838 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.22■□□□□ 0.99
NFKB1P19838 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.22■□□□□ 0.99
NFKB1P19838 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.22■□□□□ 0.99
NFKB1P19838 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
NFKB1P19838 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
NFKB1P19838 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NFKB1P19838 AC097381.1-201ENST00000429019 1296 ntBASIC21.21■□□□□ 0.99
NFKB1P19838 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.21■□□□□ 0.99
NFKB1P19838 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.21■□□□□ 0.99
NFKB1P19838 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NFKB1P19838 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.21■□□□□ 0.99
NFKB1P19838 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NFKB1P19838 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NFKB1P19838 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NFKB1P19838 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NFKB1P19838 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.2■□□□□ 0.98
NFKB1P19838 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
NFKB1P19838 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NFKB1P19838 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.2■□□□□ 0.98
NFKB1P19838 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.2■□□□□ 0.98
NFKB1P19838 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.2■□□□□ 0.98
NFKB1P19838 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
NFKB1P19838 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NFKB1P19838 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
NFKB1P19838 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NFKB1P19838 AC019069.1-201ENST00000610008 1333 ntBASIC21.2■□□□□ 0.98
NFKB1P19838 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NFKB1P19838 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms