Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VCLP18206 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.96■□□□□ 0.95
VCLP18206 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VCLP18206 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.96■□□□□ 0.95
VCLP18206 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VCLP18206 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
VCLP18206 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VCLP18206 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VCLP18206 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VCLP18206 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
VCLP18206 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.96■□□□□ 0.95
VCLP18206 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
VCLP18206 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VCLP18206 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VCLP18206 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
VCLP18206 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VCLP18206 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
VCLP18206 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
VCLP18206 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VCLP18206 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.95■□□□□ 0.94
VCLP18206 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.95■□□□□ 0.94
VCLP18206 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.95■□□□□ 0.94
VCLP18206 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VCLP18206 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.95■□□□□ 0.94
VCLP18206 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.95■□□□□ 0.94
VCLP18206 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VCLP18206 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.95■□□□□ 0.94
VCLP18206 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VCLP18206 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
VCLP18206 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VCLP18206 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VCLP18206 AC244015.2-201ENST00000616358 1861 ntBASIC20.94■□□□□ 0.94
VCLP18206 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
VCLP18206 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VCLP18206 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VCLP18206 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VCLP18206 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.94■□□□□ 0.94
VCLP18206 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VCLP18206 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
VCLP18206 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
VCLP18206 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VCLP18206 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VCLP18206 AC092666.2-201ENST00000613287 246 ntBASIC20.94■□□□□ 0.94
VCLP18206 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VCLP18206 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.94■□□□□ 0.94
VCLP18206 AC005229.4-201ENST00000610085 2198 ntBASIC20.94■□□□□ 0.94
VCLP18206 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
VCLP18206 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.94■□□□□ 0.94
VCLP18206 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
VCLP18206 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VCLP18206 AC004854.2-201ENST00000608450 1441 ntBASIC20.94■□□□□ 0.94
VCLP18206 AC026471.6-201ENST00000622954 1905 ntBASIC20.94■□□□□ 0.94
VCLP18206 AP004607.4-201ENST00000530158 1459 ntBASIC20.94■□□□□ 0.94
VCLP18206 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VCLP18206 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
VCLP18206 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VCLP18206 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VCLP18206 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VCLP18206 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
VCLP18206 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.93■□□□□ 0.94
VCLP18206 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.93■□□□□ 0.94
VCLP18206 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.93■□□□□ 0.94
VCLP18206 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.93■□□□□ 0.94
VCLP18206 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
VCLP18206 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VCLP18206 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VCLP18206 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VCLP18206 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.93■□□□□ 0.94
VCLP18206 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VCLP18206 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VCLP18206 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VCLP18206 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VCLP18206 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VCLP18206 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.92■□□□□ 0.94
VCLP18206 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.92■□□□□ 0.94
VCLP18206 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
VCLP18206 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VCLP18206 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
VCLP18206 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
VCLP18206 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.92■□□□□ 0.94
VCLP18206 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
VCLP18206 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
VCLP18206 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VCLP18206 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VCLP18206 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VCLP18206 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VCLP18206 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
VCLP18206 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.91■□□□□ 0.94
VCLP18206 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VCLP18206 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VCLP18206 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.91■□□□□ 0.94
VCLP18206 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.91■□□□□ 0.94
VCLP18206 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.91■□□□□ 0.94
VCLP18206 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.91■□□□□ 0.94
VCLP18206 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.91■□□□□ 0.94
VCLP18206 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
VCLP18206 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
VCLP18206 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
VCLP18206 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VCLP18206 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms