Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.74■□□□□ 0.75
RAB40ALP0C0E4 AC061975.6-201ENST00000579045 1553 ntBASIC19.74■□□□□ 0.75
RAB40ALP0C0E4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB40ALP0C0E4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB40ALP0C0E4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RAB40ALP0C0E4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB40ALP0C0E4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RAB40ALP0C0E4 AC093787.1-201ENST00000450396 207 ntBASIC19.73■□□□□ 0.75
RAB40ALP0C0E4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.73■□□□□ 0.75
RAB40ALP0C0E4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB40ALP0C0E4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.73■□□□□ 0.75
RAB40ALP0C0E4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.73■□□□□ 0.75
RAB40ALP0C0E4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.73■□□□□ 0.75
RAB40ALP0C0E4 AC092118.2-201ENST00000613495 667 ntBASIC19.73■□□□□ 0.75
RAB40ALP0C0E4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.73■□□□□ 0.75
RAB40ALP0C0E4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RAB40ALP0C0E4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.73■□□□□ 0.75
RAB40ALP0C0E4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB40ALP0C0E4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RAB40ALP0C0E4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB40ALP0C0E4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.73■□□□□ 0.75
RAB40ALP0C0E4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RAB40ALP0C0E4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB40ALP0C0E4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RAB40ALP0C0E4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB40ALP0C0E4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB40ALP0C0E4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
RAB40ALP0C0E4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB40ALP0C0E4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB40ALP0C0E4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB40ALP0C0E4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RAB40ALP0C0E4 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.72■□□□□ 0.75
RAB40ALP0C0E4 TSPY20P-201ENST00000450910 630 ntBASIC19.72■□□□□ 0.75
RAB40ALP0C0E4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.72■□□□□ 0.75
RAB40ALP0C0E4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.72■□□□□ 0.75
RAB40ALP0C0E4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
RAB40ALP0C0E4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RAB40ALP0C0E4 AC098934.4-201ENST00000564127 592 ntBASIC19.72■□□□□ 0.75
RAB40ALP0C0E4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.72■□□□□ 0.75
RAB40ALP0C0E4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.72■□□□□ 0.75
RAB40ALP0C0E4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
RAB40ALP0C0E4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RAB40ALP0C0E4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RAB40ALP0C0E4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB40ALP0C0E4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAB40ALP0C0E4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAB40ALP0C0E4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB40ALP0C0E4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB40ALP0C0E4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.71■□□□□ 0.75
RAB40ALP0C0E4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAB40ALP0C0E4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.71■□□□□ 0.75
RAB40ALP0C0E4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAB40ALP0C0E4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB40ALP0C0E4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAB40ALP0C0E4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
RAB40ALP0C0E4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAB40ALP0C0E4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB40ALP0C0E4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RAB40ALP0C0E4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAB40ALP0C0E4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.7■□□□□ 0.74
RAB40ALP0C0E4 RARRES2P4-201ENST00000514074 484 ntBASIC19.7■□□□□ 0.74
RAB40ALP0C0E4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.7■□□□□ 0.74
RAB40ALP0C0E4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.7■□□□□ 0.74
RAB40ALP0C0E4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAB40ALP0C0E4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAB40ALP0C0E4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAB40ALP0C0E4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAB40ALP0C0E4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB40ALP0C0E4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
RAB40ALP0C0E4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.7■□□□□ 0.74
RAB40ALP0C0E4 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RAB40ALP0C0E4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.69■□□□□ 0.74
RAB40ALP0C0E4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.69■□□□□ 0.74
RAB40ALP0C0E4 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAB40ALP0C0E4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.69■□□□□ 0.74
RAB40ALP0C0E4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB40ALP0C0E4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.69■□□□□ 0.74
RAB40ALP0C0E4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.69■□□□□ 0.74
RAB40ALP0C0E4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB40ALP0C0E4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB40ALP0C0E4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.69■□□□□ 0.74
RAB40ALP0C0E4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB40ALP0C0E4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.69■□□□□ 0.74
RAB40ALP0C0E4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB40ALP0C0E4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB40ALP0C0E4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB40ALP0C0E4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.69■□□□□ 0.74
RAB40ALP0C0E4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAB40ALP0C0E4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RAB40ALP0C0E4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB40ALP0C0E4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB40ALP0C0E4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.68■□□□□ 0.74
RAB40ALP0C0E4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RAB40ALP0C0E4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RAB40ALP0C0E4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.68■□□□□ 0.74
RAB40ALP0C0E4 BX276092.2-201ENST00000417668 665 ntBASIC19.68■□□□□ 0.74
RAB40ALP0C0E4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RAB40ALP0C0E4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.68■□□□□ 0.74
RAB40ALP0C0E4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.68■□□□□ 0.74
RAB40ALP0C0E4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms