Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HTR1AP08908 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.07■□□□□ 0.64
HTR1AP08908 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HTR1AP08908 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
HTR1AP08908 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.07■□□□□ 0.64
HTR1AP08908 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.07■□□□□ 0.64
HTR1AP08908 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.07■□□□□ 0.64
HTR1AP08908 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.07■□□□□ 0.64
HTR1AP08908 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.07■□□□□ 0.64
HTR1AP08908 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
HTR1AP08908 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
HTR1AP08908 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
HTR1AP08908 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.06■□□□□ 0.64
HTR1AP08908 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
HTR1AP08908 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HTR1AP08908 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
HTR1AP08908 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.06■□□□□ 0.64
HTR1AP08908 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HTR1AP08908 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.06■□□□□ 0.64
HTR1AP08908 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
HTR1AP08908 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.06■□□□□ 0.64
HTR1AP08908 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HTR1AP08908 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
HTR1AP08908 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.06■□□□□ 0.64
HTR1AP08908 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
HTR1AP08908 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
HTR1AP08908 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.06■□□□□ 0.64
HTR1AP08908 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HTR1AP08908 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.06■□□□□ 0.64
HTR1AP08908 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HTR1AP08908 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.05■□□□□ 0.64
HTR1AP08908 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HTR1AP08908 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
HTR1AP08908 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HTR1AP08908 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HTR1AP08908 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HTR1AP08908 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HTR1AP08908 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
HTR1AP08908 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.05■□□□□ 0.64
HTR1AP08908 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HTR1AP08908 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.05■□□□□ 0.64
HTR1AP08908 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HTR1AP08908 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HTR1AP08908 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
HTR1AP08908 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HTR1AP08908 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HTR1AP08908 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HTR1AP08908 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
HTR1AP08908 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
HTR1AP08908 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HTR1AP08908 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HTR1AP08908 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
HTR1AP08908 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.04■□□□□ 0.64
HTR1AP08908 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
HTR1AP08908 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
HTR1AP08908 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.04■□□□□ 0.64
HTR1AP08908 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HTR1AP08908 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
HTR1AP08908 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
HTR1AP08908 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
HTR1AP08908 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HTR1AP08908 AC098818.2-201ENST00000564925 2320 ntBASIC19.04■□□□□ 0.64
HTR1AP08908 AL512408.1-201ENST00000569378 2000 ntBASIC19.04■□□□□ 0.64
HTR1AP08908 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.04■□□□□ 0.64
HTR1AP08908 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HTR1AP08908 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
HTR1AP08908 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HTR1AP08908 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.04■□□□□ 0.64
HTR1AP08908 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HTR1AP08908 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
HTR1AP08908 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.04■□□□□ 0.64
HTR1AP08908 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HTR1AP08908 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HTR1AP08908 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HTR1AP08908 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HTR1AP08908 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HTR1AP08908 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.03■□□□□ 0.64
HTR1AP08908 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
HTR1AP08908 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
HTR1AP08908 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.03■□□□□ 0.64
HTR1AP08908 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.03■□□□□ 0.64
HTR1AP08908 Z92544.1-202ENST00000571933 1220 ntBASIC19.03■□□□□ 0.64
HTR1AP08908 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.03■□□□□ 0.64
HTR1AP08908 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.03■□□□□ 0.64
HTR1AP08908 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HTR1AP08908 AC018445.3-201ENST00000624177 1945 ntBASIC19.03■□□□□ 0.64
HTR1AP08908 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HTR1AP08908 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
HTR1AP08908 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HTR1AP08908 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HTR1AP08908 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HTR1AP08908 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HTR1AP08908 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HTR1AP08908 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HTR1AP08908 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HTR1AP08908 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HTR1AP08908 AC003102.1-202ENST00000563394 1796 ntBASIC19.02■□□□□ 0.64
HTR1AP08908 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
HTR1AP08908 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HTR1AP08908 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms