Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.12■□□□□ 0.97
MMP2P08253 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
MMP2P08253 RARRES2P11-201ENST00000635158 484 ntBASIC21.12■□□□□ 0.97
MMP2P08253 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
MMP2P08253 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
MMP2P08253 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MMP2P08253 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.11■□□□□ 0.97
MMP2P08253 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MMP2P08253 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.11■□□□□ 0.97
MMP2P08253 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MMP2P08253 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.11■□□□□ 0.97
MMP2P08253 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.11■□□□□ 0.97
MMP2P08253 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.11■□□□□ 0.97
MMP2P08253 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.11■□□□□ 0.97
MMP2P08253 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.11■□□□□ 0.97
MMP2P08253 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.11■□□□□ 0.97
MMP2P08253 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.11■□□□□ 0.97
MMP2P08253 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
MMP2P08253 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
MMP2P08253 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MMP2P08253 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
MMP2P08253 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MMP2P08253 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MMP2P08253 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MMP2P08253 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
MMP2P08253 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
MMP2P08253 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MMP2P08253 SLC7A5P1-201ENST00000568957 537 ntBASIC21.1■□□□□ 0.97
MMP2P08253 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MMP2P08253 AC120498.10-201ENST00000621827 505 ntBASIC21.1■□□□□ 0.97
MMP2P08253 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MMP2P08253 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MMP2P08253 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
MMP2P08253 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.09■□□□□ 0.97
MMP2P08253 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.09■□□□□ 0.97
MMP2P08253 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
MMP2P08253 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MMP2P08253 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
MMP2P08253 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
MMP2P08253 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.09■□□□□ 0.97
MMP2P08253 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.09■□□□□ 0.97
MMP2P08253 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.09■□□□□ 0.97
MMP2P08253 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MMP2P08253 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
MMP2P08253 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MMP2P08253 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MMP2P08253 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
MMP2P08253 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
MMP2P08253 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
MMP2P08253 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MMP2P08253 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MMP2P08253 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.08■□□□□ 0.97
MMP2P08253 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.08■□□□□ 0.97
MMP2P08253 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MMP2P08253 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.08■□□□□ 0.97
MMP2P08253 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.08■□□□□ 0.97
MMP2P08253 AC137761.2-201ENST00000561729 223 ntBASIC21.08■□□□□ 0.97
MMP2P08253 AC145350.3-201ENST00000569033 163 ntBASIC21.08■□□□□ 0.97
MMP2P08253 AC022517.1-201ENST00000592429 346 ntBASIC21.08■□□□□ 0.97
MMP2P08253 MYCNOS-205ENST00000641950 531 ntBASIC21.08■□□□□ 0.97
MMP2P08253 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
MMP2P08253 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.08■□□□□ 0.96
MMP2P08253 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
MMP2P08253 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
MMP2P08253 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
MMP2P08253 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
MMP2P08253 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MMP2P08253 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MMP2P08253 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.07■□□□□ 0.96
MMP2P08253 AC006015.1-201ENST00000429970 570 ntBASIC21.07■□□□□ 0.96
MMP2P08253 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.07■□□□□ 0.96
MMP2P08253 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.07■□□□□ 0.96
MMP2P08253 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.07■□□□□ 0.96
MMP2P08253 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MMP2P08253 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MMP2P08253 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
MMP2P08253 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.07■□□□□ 0.96
MMP2P08253 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
MMP2P08253 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MMP2P08253 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MMP2P08253 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.07■□□□□ 0.96
MMP2P08253 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.07■□□□□ 0.96
MMP2P08253 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
MMP2P08253 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MMP2P08253 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MMP2P08253 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MMP2P08253 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MMP2P08253 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.06■□□□□ 0.96
MMP2P08253 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.06■□□□□ 0.96
MMP2P08253 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MMP2P08253 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MMP2P08253 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.06■□□□□ 0.96
MMP2P08253 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MMP2P08253 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.05■□□□□ 0.96
MMP2P08253 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MMP2P08253 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.05■□□□□ 0.96
MMP2P08253 RBM17P2-201ENST00000616397 1405 ntBASIC21.05■□□□□ 0.96
MMP2P08253 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MMP2P08253 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.05■□□□□ 0.96
MMP2P08253 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms