Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-AP01891 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.6■□□□□ 0.41
HLA-AP01891 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-AP01891 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-AP01891 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-AP01891 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
HLA-AP01891 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.6■□□□□ 0.41
HLA-AP01891 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-AP01891 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HLA-AP01891 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.6■□□□□ 0.41
HLA-AP01891 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.6■□□□□ 0.41
HLA-AP01891 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
HLA-AP01891 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-AP01891 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-AP01891 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-AP01891 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.59■□□□□ 0.41
HLA-AP01891 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.59■□□□□ 0.41
HLA-AP01891 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-AP01891 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.59■□□□□ 0.41
HLA-AP01891 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-AP01891 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-AP01891 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.59■□□□□ 0.41
HLA-AP01891 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
HLA-AP01891 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-AP01891 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-AP01891 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-AP01891 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
HLA-AP01891 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HLA-AP01891 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.59■□□□□ 0.41
HLA-AP01891 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
HLA-AP01891 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HLA-AP01891 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HLA-AP01891 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HLA-AP01891 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
HLA-AP01891 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HLA-AP01891 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HLA-AP01891 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-AP01891 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
HLA-AP01891 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-AP01891 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.58■□□□□ 0.4
HLA-AP01891 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-AP01891 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
HLA-AP01891 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.58■□□□□ 0.4
HLA-AP01891 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.58■□□□□ 0.4
HLA-AP01891 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.58■□□□□ 0.4
HLA-AP01891 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.58■□□□□ 0.4
HLA-AP01891 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.58■□□□□ 0.4
HLA-AP01891 MIR6722-201ENST00000617286 78 ntBASIC17.58■□□□□ 0.4
HLA-AP01891 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.58■□□□□ 0.4
HLA-AP01891 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
HLA-AP01891 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-AP01891 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-AP01891 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-AP01891 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-AP01891 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-AP01891 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.57■□□□□ 0.4
HLA-AP01891 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-AP01891 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-AP01891 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.57■□□□□ 0.4
HLA-AP01891 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-AP01891 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-AP01891 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
HLA-AP01891 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-AP01891 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-AP01891 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-AP01891 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
HLA-AP01891 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-AP01891 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
HLA-AP01891 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-AP01891 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-AP01891 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-AP01891 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HLA-AP01891 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
HLA-AP01891 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-AP01891 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
HLA-AP01891 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
HLA-AP01891 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
HLA-AP01891 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
HLA-AP01891 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-AP01891 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.56■□□□□ 0.4
HLA-AP01891 MTDHP2-201ENST00000601468 714 ntBASIC17.56■□□□□ 0.4
HLA-AP01891 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-AP01891 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HLA-AP01891 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-AP01891 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.56■□□□□ 0.4
HLA-AP01891 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HLA-AP01891 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HLA-AP01891 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-AP01891 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-AP01891 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-AP01891 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-AP01891 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-AP01891 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-AP01891 UNC93B8-201ENST00000511903 705 ntBASIC17.55■□□□□ 0.4
HLA-AP01891 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.55■□□□□ 0.4
HLA-AP01891 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-AP01891 AL020996.1-203ENST00000536896 2307 ntBASIC17.55■□□□□ 0.4
HLA-AP01891 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-AP01891 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.55■□□□□ 0.4
HLA-AP01891 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms