Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
MT-CO1P00395 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MT-CO1P00395 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MT-CO1P00395 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.41■■□□□ 1.02
MT-CO1P00395 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
MT-CO1P00395 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
MT-CO1P00395 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MT-CO1P00395 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
MT-CO1P00395 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MT-CO1P00395 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.41■■□□□ 1.02
MT-CO1P00395 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.41■■□□□ 1.02
MT-CO1P00395 CROCCP5-201ENST00000436658 830 ntBASIC21.41■■□□□ 1.02
MT-CO1P00395 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.41■■□□□ 1.02
MT-CO1P00395 SLC7A5P1-201ENST00000568957 537 ntBASIC21.41■■□□□ 1.02
MT-CO1P00395 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
MT-CO1P00395 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.41■■□□□ 1.02
MT-CO1P00395 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MT-CO1P00395 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MT-CO1P00395 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.41■■□□□ 1.02
MT-CO1P00395 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
MT-CO1P00395 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
MT-CO1P00395 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MT-CO1P00395 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.4■■□□□ 1.02
MT-CO1P00395 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.4■■□□□ 1.02
MT-CO1P00395 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MT-CO1P00395 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.4■■□□□ 1.02
MT-CO1P00395 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MT-CO1P00395 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.4■■□□□ 1.02
MT-CO1P00395 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.4■■□□□ 1.02
MT-CO1P00395 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.4■■□□□ 1.02
MT-CO1P00395 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.4■■□□□ 1.02
MT-CO1P00395 AC010536.3-201ENST00000620306 533 ntBASIC21.4■■□□□ 1.02
MT-CO1P00395 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
MT-CO1P00395 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.4■■□□□ 1.02
MT-CO1P00395 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MT-CO1P00395 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.4■■□□□ 1.02
MT-CO1P00395 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
MT-CO1P00395 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
MT-CO1P00395 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
MT-CO1P00395 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
MT-CO1P00395 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.39■■□□□ 1.01
MT-CO1P00395 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
MT-CO1P00395 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
MT-CO1P00395 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.39■■□□□ 1.01
MT-CO1P00395 CNN2P6-201ENST00000439038 900 ntBASIC21.39■■□□□ 1.01
MT-CO1P00395 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.39■■□□□ 1.01
MT-CO1P00395 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.39■■□□□ 1.01
MT-CO1P00395 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
MT-CO1P00395 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
MT-CO1P00395 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.39■■□□□ 1.01
MT-CO1P00395 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.39■■□□□ 1.01
MT-CO1P00395 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
MT-CO1P00395 FBXW4P1-201ENST00000426721 2239 ntBASIC21.39■■□□□ 1.01
MT-CO1P00395 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
MT-CO1P00395 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.38■■□□□ 1.01
MT-CO1P00395 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.38■■□□□ 1.01
MT-CO1P00395 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
MT-CO1P00395 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.38■■□□□ 1.01
MT-CO1P00395 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.38■■□□□ 1.01
MT-CO1P00395 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
MT-CO1P00395 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MT-CO1P00395 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.38■■□□□ 1.01
MT-CO1P00395 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.38■■□□□ 1.01
MT-CO1P00395 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
MT-CO1P00395 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.38■■□□□ 1.01
MT-CO1P00395 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.38■■□□□ 1.01
MT-CO1P00395 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.38■■□□□ 1.01
MT-CO1P00395 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
MT-CO1P00395 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
MT-CO1P00395 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
MT-CO1P00395 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
MT-CO1P00395 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.38■■□□□ 1.01
MT-CO1P00395 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MT-CO1P00395 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MT-CO1P00395 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MT-CO1P00395 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.38■■□□□ 1.01
MT-CO1P00395 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.37■■□□□ 1.01
MT-CO1P00395 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
MT-CO1P00395 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MT-CO1P00395 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MT-CO1P00395 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
MT-CO1P00395 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MT-CO1P00395 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MT-CO1P00395 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.37■■□□□ 1.01
MT-CO1P00395 AC120498.10-201ENST00000621827 505 ntBASIC21.37■■□□□ 1.01
MT-CO1P00395 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.37■■□□□ 1.01
MT-CO1P00395 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
MT-CO1P00395 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.37■■□□□ 1.01
MT-CO1P00395 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
MT-CO1P00395 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
MT-CO1P00395 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
MT-CO1P00395 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.37■■□□□ 1.01
MT-CO1P00395 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MT-CO1P00395 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
MT-CO1P00395 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
MT-CO1P00395 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
MT-CO1P00395 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MT-CO1P00395 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
MT-CO1P00395 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MT-CO1P00395 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms