Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RTN3O95197 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.04■■□□□ 1.12
RTN3O95197 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.04■■□□□ 1.12
RTN3O95197 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTN3O95197 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTN3O95197 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTN3O95197 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTN3O95197 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.04■■□□□ 1.12
RTN3O95197 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.03■■□□□ 1.12
RTN3O95197 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RTN3O95197 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
RTN3O95197 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RTN3O95197 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
RTN3O95197 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RTN3O95197 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RTN3O95197 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
RTN3O95197 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.03■■□□□ 1.12
RTN3O95197 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC22.03■■□□□ 1.12
RTN3O95197 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC22.03■■□□□ 1.12
RTN3O95197 AC243732.1-201ENST00000612648 864 ntBASIC22.03■■□□□ 1.12
RTN3O95197 RBM17P2-201ENST00000616397 1405 ntBASIC22.03■■□□□ 1.12
RTN3O95197 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RTN3O95197 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.03■■□□□ 1.12
RTN3O95197 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.03■■□□□ 1.12
RTN3O95197 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RTN3O95197 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC22.02■■□□□ 1.12
RTN3O95197 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.02■■□□□ 1.12
RTN3O95197 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
RTN3O95197 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.02■■□□□ 1.12
RTN3O95197 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RTN3O95197 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RTN3O95197 C11orf96-202ENST00000528572 1834 ntBASIC22.02■■□□□ 1.12
RTN3O95197 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
RTN3O95197 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.02■■□□□ 1.12
RTN3O95197 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
RTN3O95197 GPX1P1-201ENST00000388829 606 ntBASIC22.02■■□□□ 1.12
RTN3O95197 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RTN3O95197 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RTN3O95197 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC22.02■■□□□ 1.12
RTN3O95197 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RTN3O95197 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC22.02■■□□□ 1.12
RTN3O95197 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.02■■□□□ 1.12
RTN3O95197 AL050303.2-201ENST00000619798 666 ntBASIC22.02■■□□□ 1.12
RTN3O95197 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RTN3O95197 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
RTN3O95197 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
RTN3O95197 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
RTN3O95197 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RTN3O95197 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.01■■□□□ 1.11
RTN3O95197 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.01■■□□□ 1.11
RTN3O95197 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTN3O95197 AL121832.2-201ENST00000610979 668 ntBASIC22.01■■□□□ 1.11
RTN3O95197 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RTN3O95197 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RTN3O95197 BET1L-204ENST00000410108 637 ntTSL 3 BASIC22■■□□□ 1.11
RTN3O95197 APTR-203ENST00000430801 583 ntTSL 5 BASIC22■■□□□ 1.11
RTN3O95197 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RTN3O95197 AL109923.1-201ENST00000618799 583 ntBASIC22■■□□□ 1.11
RTN3O95197 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTN3O95197 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RTN3O95197 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RTN3O95197 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTN3O95197 AC068338.2-201ENST00000563278 1430 ntBASIC21.99■■□□□ 1.11
RTN3O95197 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTN3O95197 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.99■■□□□ 1.11
RTN3O95197 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTN3O95197 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.99■■□□□ 1.11
RTN3O95197 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.99■■□□□ 1.11
RTN3O95197 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTN3O95197 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.99■■□□□ 1.11
RTN3O95197 AC104771.1-201ENST00000603335 964 ntBASIC21.99■■□□□ 1.11
RTN3O95197 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.99■■□□□ 1.11
RTN3O95197 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.99■■□□□ 1.11
RTN3O95197 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
RTN3O95197 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.99■■□□□ 1.11
RTN3O95197 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RTN3O95197 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
RTN3O95197 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTN3O95197 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RTN3O95197 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.98■■□□□ 1.11
RTN3O95197 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.98■■□□□ 1.11
RTN3O95197 AC133552.2-202ENST00000575694 574 ntBASIC21.98■■□□□ 1.11
RTN3O95197 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.98■■□□□ 1.11
RTN3O95197 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.97■■□□□ 1.11
RTN3O95197 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTN3O95197 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RTN3O95197 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RTN3O95197 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTN3O95197 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTN3O95197 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTN3O95197 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RTN3O95197 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTN3O95197 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
RTN3O95197 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.97■■□□□ 1.11
RTN3O95197 AC245052.3-201ENST00000450182 901 ntBASIC21.97■■□□□ 1.11
RTN3O95197 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.97■■□□□ 1.11
RTN3O95197 AC083906.2-201ENST00000511578 360 ntBASIC21.97■■□□□ 1.11
RTN3O95197 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.97■■□□□ 1.11
RTN3O95197 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RTN3O95197 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms