Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDRT1O95170 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDRT1O95170 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDRT1O95170 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDRT1O95170 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDRT1O95170 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDRT1O95170 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.59■□□□□ 0.57
CDRT1O95170 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDRT1O95170 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDRT1O95170 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDRT1O95170 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDRT1O95170 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.59■□□□□ 0.57
CDRT1O95170 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDRT1O95170 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.59■□□□□ 0.57
CDRT1O95170 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CDRT1O95170 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDRT1O95170 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.59■□□□□ 0.57
CDRT1O95170 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
CDRT1O95170 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDRT1O95170 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.58■□□□□ 0.57
CDRT1O95170 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDRT1O95170 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.58■□□□□ 0.57
CDRT1O95170 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDRT1O95170 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
CDRT1O95170 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDRT1O95170 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CDRT1O95170 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CDRT1O95170 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CDRT1O95170 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CDRT1O95170 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CDRT1O95170 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDRT1O95170 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDRT1O95170 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDRT1O95170 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.58■□□□□ 0.56
CDRT1O95170 PLK5-205ENST00000642079 1969 ntBASIC18.58■□□□□ 0.56
CDRT1O95170 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDRT1O95170 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDRT1O95170 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CDRT1O95170 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CDRT1O95170 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDRT1O95170 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDRT1O95170 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.58■□□□□ 0.56
CDRT1O95170 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDRT1O95170 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
CDRT1O95170 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDRT1O95170 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDRT1O95170 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CDRT1O95170 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDRT1O95170 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CDRT1O95170 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDRT1O95170 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.57■□□□□ 0.56
CDRT1O95170 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.57■□□□□ 0.56
CDRT1O95170 AL451085.2-201ENST00000605085 799 ntBASIC18.57■□□□□ 0.56
CDRT1O95170 AL499627.2-201ENST00000606283 725 ntBASIC18.57■□□□□ 0.56
CDRT1O95170 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDRT1O95170 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDRT1O95170 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDRT1O95170 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.57■□□□□ 0.56
CDRT1O95170 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CDRT1O95170 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDRT1O95170 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CDRT1O95170 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CDRT1O95170 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDRT1O95170 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.57■□□□□ 0.56
CDRT1O95170 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.57■□□□□ 0.56
CDRT1O95170 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CDRT1O95170 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.56■□□□□ 0.56
CDRT1O95170 AL020996.1-203ENST00000536896 2307 ntBASIC18.56■□□□□ 0.56
CDRT1O95170 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CDRT1O95170 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDRT1O95170 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CDRT1O95170 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDRT1O95170 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.56■□□□□ 0.56
CDRT1O95170 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDRT1O95170 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CDRT1O95170 AL117332.1-201ENST00000622628 974 ntBASIC18.56■□□□□ 0.56
CDRT1O95170 AL031602.1-201ENST00000633169 911 ntBASIC18.56■□□□□ 0.56
CDRT1O95170 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDRT1O95170 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CDRT1O95170 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CDRT1O95170 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.56■□□□□ 0.56
CDRT1O95170 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDRT1O95170 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDRT1O95170 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDRT1O95170 AC027702.1-201ENST00000563810 1770 ntBASIC18.55■□□□□ 0.56
CDRT1O95170 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CDRT1O95170 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.55■□□□□ 0.56
CDRT1O95170 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.55■□□□□ 0.56
CDRT1O95170 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDRT1O95170 UNC93B8-201ENST00000511903 705 ntBASIC18.55■□□□□ 0.56
CDRT1O95170 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDRT1O95170 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.55■□□□□ 0.56
CDRT1O95170 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.55■□□□□ 0.56
CDRT1O95170 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDRT1O95170 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.55■□□□□ 0.56
CDRT1O95170 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDRT1O95170 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.55■□□□□ 0.56
CDRT1O95170 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDRT1O95170 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.55■□□□□ 0.56
CDRT1O95170 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms