Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
UBE4BO95155 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
UBE4BO95155 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
UBE4BO95155 AC245052.3-201ENST00000450182 901 ntBASIC22.91■■□□□ 1.26
UBE4BO95155 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.91■■□□□ 1.26
UBE4BO95155 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.91■■□□□ 1.26
UBE4BO95155 SLC7A5P2-201ENST00000553010 536 ntBASIC22.91■■□□□ 1.26
UBE4BO95155 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
UBE4BO95155 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.91■■□□□ 1.26
UBE4BO95155 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.91■■□□□ 1.26
UBE4BO95155 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.91■■□□□ 1.26
UBE4BO95155 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.91■■□□□ 1.26
UBE4BO95155 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.91■■□□□ 1.26
UBE4BO95155 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
UBE4BO95155 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC22.91■■□□□ 1.26
UBE4BO95155 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
UBE4BO95155 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
UBE4BO95155 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
UBE4BO95155 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
UBE4BO95155 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
UBE4BO95155 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.9■■□□□ 1.26
UBE4BO95155 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.9■■□□□ 1.26
UBE4BO95155 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.9■■□□□ 1.26
UBE4BO95155 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
UBE4BO95155 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
UBE4BO95155 MIR935-201ENST00000401179 91 ntBASIC22.9■■□□□ 1.26
UBE4BO95155 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.9■■□□□ 1.26
UBE4BO95155 MIR5787-201ENST00000611784 55 ntBASIC22.9■■□□□ 1.26
UBE4BO95155 RARRES2P11-201ENST00000635158 484 ntBASIC22.9■■□□□ 1.26
UBE4BO95155 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.9■■□□□ 1.26
UBE4BO95155 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.9■■□□□ 1.26
UBE4BO95155 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
UBE4BO95155 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
UBE4BO95155 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
UBE4BO95155 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
UBE4BO95155 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
UBE4BO95155 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
UBE4BO95155 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
UBE4BO95155 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.89■■□□□ 1.26
UBE4BO95155 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
UBE4BO95155 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.89■■□□□ 1.26
UBE4BO95155 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
UBE4BO95155 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.89■■□□□ 1.26
UBE4BO95155 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
UBE4BO95155 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
UBE4BO95155 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.25
UBE4BO95155 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
UBE4BO95155 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
UBE4BO95155 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.88■■□□□ 1.25
UBE4BO95155 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC22.88■■□□□ 1.25
UBE4BO95155 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.88■■□□□ 1.25
UBE4BO95155 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.88■■□□□ 1.25
UBE4BO95155 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC22.88■■□□□ 1.25
UBE4BO95155 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
UBE4BO95155 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.88■■□□□ 1.25
UBE4BO95155 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
UBE4BO95155 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.87■■□□□ 1.25
UBE4BO95155 UBE2DNL-204ENST00000602536 740 ntBASIC22.87■■□□□ 1.25
UBE4BO95155 AC243732.1-201ENST00000612648 864 ntBASIC22.87■■□□□ 1.25
UBE4BO95155 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
UBE4BO95155 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
UBE4BO95155 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
UBE4BO95155 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
UBE4BO95155 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
UBE4BO95155 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
UBE4BO95155 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
UBE4BO95155 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
UBE4BO95155 EXOC3-AS1-202ENST00000623673 1663 ntBASIC22.87■■□□□ 1.25
UBE4BO95155 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC22.87■■□□□ 1.25
UBE4BO95155 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
UBE4BO95155 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.87■■□□□ 1.25
UBE4BO95155 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
UBE4BO95155 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.86■■□□□ 1.25
UBE4BO95155 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.86■■□□□ 1.25
UBE4BO95155 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.86■■□□□ 1.25
UBE4BO95155 ANKRD20A6P-201ENST00000618763 204 ntBASIC22.86■■□□□ 1.25
UBE4BO95155 MYCNOS-205ENST00000641950 531 ntBASIC22.86■■□□□ 1.25
UBE4BO95155 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
UBE4BO95155 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.86■■□□□ 1.25
UBE4BO95155 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.86■■□□□ 1.25
UBE4BO95155 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
UBE4BO95155 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
UBE4BO95155 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.85■■□□□ 1.25
UBE4BO95155 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
UBE4BO95155 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.85■■□□□ 1.25
UBE4BO95155 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
UBE4BO95155 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.85■■□□□ 1.25
UBE4BO95155 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
UBE4BO95155 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.85■■□□□ 1.25
UBE4BO95155 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.85■■□□□ 1.25
UBE4BO95155 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
UBE4BO95155 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
UBE4BO95155 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
UBE4BO95155 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
UBE4BO95155 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.84■■□□□ 1.25
UBE4BO95155 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
UBE4BO95155 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.84■■□□□ 1.25
UBE4BO95155 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.84■■□□□ 1.25
UBE4BO95155 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC22.84■■□□□ 1.25
UBE4BO95155 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.84■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms