Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
PCF11O94913 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
PCF11O94913 OR2A1-AS1-201ENST00000462305 773 ntBASIC32.87■■■□□ 2.85
PCF11O94913 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC32.87■■■□□ 2.85
PCF11O94913 CYP2T3P-201ENST00000601990 817 ntBASIC32.87■■■□□ 2.85
PCF11O94913 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC32.87■■■□□ 2.85
PCF11O94913 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC32.87■■■□□ 2.85
PCF11O94913 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC32.86■■■□□ 2.85
PCF11O94913 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC32.86■■■□□ 2.85
PCF11O94913 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC32.86■■■□□ 2.85
PCF11O94913 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC32.86■■■□□ 2.85
PCF11O94913 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC32.86■■■□□ 2.85
PCF11O94913 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
PCF11O94913 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC32.86■■■□□ 2.85
PCF11O94913 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC32.86■■■□□ 2.85
PCF11O94913 GALC-202ENST00000393568 2054 ntTSL 2 BASIC32.85■■■□□ 2.85
PCF11O94913 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC32.85■■■□□ 2.85
PCF11O94913 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC32.85■■■□□ 2.85
PCF11O94913 ADM-205ENST00000528544 586 ntTSL 2 BASIC32.85■■■□□ 2.85
PCF11O94913 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
PCF11O94913 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
PCF11O94913 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC32.85■■■□□ 2.85
PCF11O94913 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC32.84■■■□□ 2.85
PCF11O94913 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
PCF11O94913 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC32.84■■■□□ 2.85
PCF11O94913 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
PCF11O94913 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
PCF11O94913 AC242852.2-201ENST00000615738 1807 ntBASIC32.84■■■□□ 2.85
PCF11O94913 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC32.83■■■□□ 2.85
PCF11O94913 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
PCF11O94913 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
PCF11O94913 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC32.83■■■□□ 2.85
PCF11O94913 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC32.83■■■□□ 2.85
PCF11O94913 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC32.83■■■□□ 2.85
PCF11O94913 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC32.83■■■□□ 2.85
PCF11O94913 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC32.83■■■□□ 2.85
PCF11O94913 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
PCF11O94913 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
PCF11O94913 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC32.83■■■□□ 2.85
PCF11O94913 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
PCF11O94913 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC32.83■■■□□ 2.85
PCF11O94913 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC32.82■■■□□ 2.85
PCF11O94913 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC32.82■■■□□ 2.85
PCF11O94913 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC32.82■■■□□ 2.85
PCF11O94913 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
PCF11O94913 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC32.82■■■□□ 2.84
PCF11O94913 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC32.82■■■□□ 2.84
PCF11O94913 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
PCF11O94913 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC32.82■■■□□ 2.84
PCF11O94913 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC32.82■■■□□ 2.84
PCF11O94913 MIR1224-201ENST00000408193 85 ntBASIC32.82■■■□□ 2.84
PCF11O94913 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC32.82■■■□□ 2.84
PCF11O94913 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC32.82■■■□□ 2.84
PCF11O94913 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
PCF11O94913 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
PCF11O94913 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
PCF11O94913 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
PCF11O94913 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC32.81■■■□□ 2.84
PCF11O94913 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC32.81■■■□□ 2.84
PCF11O94913 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC32.81■■■□□ 2.84
PCF11O94913 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC32.81■■■□□ 2.84
PCF11O94913 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC32.81■■■□□ 2.84
PCF11O94913 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
PCF11O94913 GUSBP5-202ENST00000510805 1989 ntBASIC32.8■■■□□ 2.84
PCF11O94913 AC007322.3-201ENST00000426526 701 ntBASIC32.8■■■□□ 2.84
PCF11O94913 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
PCF11O94913 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC32.8■■■□□ 2.84
PCF11O94913 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
PCF11O94913 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC32.8■■■□□ 2.84
PCF11O94913 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
PCF11O94913 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC32.8■■■□□ 2.84
PCF11O94913 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
PCF11O94913 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
PCF11O94913 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
PCF11O94913 AC097658.1-201ENST00000475555 843 ntBASIC32.79■■■□□ 2.84
PCF11O94913 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
PCF11O94913 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
PCF11O94913 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC32.79■■■□□ 2.84
PCF11O94913 UNC93B5-201ENST00000530315 699 ntBASIC32.79■■■□□ 2.84
PCF11O94913 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC32.79■■■□□ 2.84
PCF11O94913 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC32.78■■■□□ 2.84
PCF11O94913 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC32.78■■■□□ 2.84
PCF11O94913 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC32.78■■■□□ 2.84
PCF11O94913 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
PCF11O94913 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
PCF11O94913 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC32.78■■■□□ 2.84
PCF11O94913 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC32.78■■■□□ 2.84
PCF11O94913 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
PCF11O94913 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
PCF11O94913 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC32.77■■■□□ 2.84
PCF11O94913 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC32.77■■■□□ 2.84
PCF11O94913 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC32.77■■■□□ 2.84
PCF11O94913 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC32.77■■■□□ 2.84
PCF11O94913 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC32.77■■■□□ 2.84
PCF11O94913 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC32.77■■■□□ 2.84
PCF11O94913 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC32.77■■■□□ 2.84
PCF11O94913 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
PCF11O94913 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC32.76■■■□□ 2.84
PCF11O94913 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC32.76■■■□□ 2.84
PCF11O94913 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC32.76■■■□□ 2.84
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms