Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SSX4O60224 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SSX4O60224 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
SSX4O60224 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SSX4O60224 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
SSX4O60224 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SSX4O60224 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.61
SSX4O60224 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.83■□□□□ 0.61
SSX4O60224 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.83■□□□□ 0.61
SSX4O60224 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSX4O60224 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSX4O60224 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SSX4O60224 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SSX4O60224 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SSX4O60224 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.83■□□□□ 0.6
SSX4O60224 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSX4O60224 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSX4O60224 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSX4O60224 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.83■□□□□ 0.6
SSX4O60224 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSX4O60224 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSX4O60224 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SSX4O60224 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSX4O60224 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSX4O60224 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSX4O60224 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSX4O60224 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSX4O60224 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSX4O60224 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.82■□□□□ 0.6
SSX4O60224 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SSX4O60224 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.82■□□□□ 0.6
SSX4O60224 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.82■□□□□ 0.6
SSX4O60224 MIR572-201ENST00000384983 95 ntBASIC18.82■□□□□ 0.6
SSX4O60224 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.82■□□□□ 0.6
SSX4O60224 KRT18P5-201ENST00000436075 1291 ntBASIC18.82■□□□□ 0.6
SSX4O60224 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.82■□□□□ 0.6
SSX4O60224 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.82■□□□□ 0.6
SSX4O60224 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.82■□□□□ 0.6
SSX4O60224 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.82■□□□□ 0.6
SSX4O60224 AC022517.1-201ENST00000592429 346 ntBASIC18.82■□□□□ 0.6
SSX4O60224 IKBKGP1-201ENST00000612193 1073 ntBASIC18.82■□□□□ 0.6
SSX4O60224 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.82■□□□□ 0.6
SSX4O60224 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSX4O60224 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSX4O60224 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SSX4O60224 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSX4O60224 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SSX4O60224 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSX4O60224 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.81■□□□□ 0.6
SSX4O60224 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSX4O60224 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.81■□□□□ 0.6
SSX4O60224 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SSX4O60224 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.81■□□□□ 0.6
SSX4O60224 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.81■□□□□ 0.6
SSX4O60224 AC012414.1-201ENST00000556676 535 ntBASIC18.81■□□□□ 0.6
SSX4O60224 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.81■□□□□ 0.6
SSX4O60224 AC010525.1-201ENST00000585559 441 ntBASIC18.81■□□□□ 0.6
SSX4O60224 AL499627.2-201ENST00000606283 725 ntBASIC18.81■□□□□ 0.6
SSX4O60224 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.81■□□□□ 0.6
SSX4O60224 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSX4O60224 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSX4O60224 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSX4O60224 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.81■□□□□ 0.6
SSX4O60224 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.81■□□□□ 0.6
SSX4O60224 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.81■□□□□ 0.6
SSX4O60224 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SSX4O60224 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.81■□□□□ 0.6
SSX4O60224 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.81■□□□□ 0.6
SSX4O60224 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SSX4O60224 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSX4O60224 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSX4O60224 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.8■□□□□ 0.6
SSX4O60224 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSX4O60224 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.8■□□□□ 0.6
SSX4O60224 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.8■□□□□ 0.6
SSX4O60224 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.8■□□□□ 0.6
SSX4O60224 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSX4O60224 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SSX4O60224 AC027612.3-201ENST00000413684 1047 ntBASIC18.8■□□□□ 0.6
SSX4O60224 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.8■□□□□ 0.6
SSX4O60224 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.8■□□□□ 0.6
SSX4O60224 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.8■□□□□ 0.6
SSX4O60224 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSX4O60224 AL137784.2-201ENST00000607332 1000 ntBASIC18.8■□□□□ 0.6
SSX4O60224 AL354811.1-201ENST00000610286 706 ntBASIC18.8■□□□□ 0.6
SSX4O60224 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSX4O60224 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSX4O60224 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSX4O60224 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.8■□□□□ 0.6
SSX4O60224 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSX4O60224 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.8■□□□□ 0.6
SSX4O60224 FP325331.1-202ENST00000623531 1380 ntBASIC18.8■□□□□ 0.6
SSX4O60224 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSX4O60224 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.79■□□□□ 0.6
SSX4O60224 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSX4O60224 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSX4O60224 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSX4O60224 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SSX4O60224 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.79■□□□□ 0.6
SSX4O60224 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms