Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RRP8O43159 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
RRP8O43159 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RRP8O43159 AL589743.5-201ENST00000616611 1050 ntBASIC19.72■□□□□ 0.75
RRP8O43159 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RRP8O43159 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RRP8O43159 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RRP8O43159 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RRP8O43159 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RRP8O43159 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RRP8O43159 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RRP8O43159 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RRP8O43159 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RRP8O43159 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RRP8O43159 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.71■□□□□ 0.75
RRP8O43159 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RRP8O43159 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RRP8O43159 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.71■□□□□ 0.75
RRP8O43159 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RRP8O43159 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.71■□□□□ 0.75
RRP8O43159 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.71■□□□□ 0.75
RRP8O43159 AP001412.1-201ENST00000608405 714 ntBASIC19.71■□□□□ 0.75
RRP8O43159 AC100791.3-201ENST00000617619 330 ntBASIC19.71■□□□□ 0.75
RRP8O43159 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RRP8O43159 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RRP8O43159 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.71■□□□□ 0.75
RRP8O43159 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RRP8O43159 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RRP8O43159 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RRP8O43159 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RRP8O43159 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RRP8O43159 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RRP8O43159 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RRP8O43159 AL355472.2-201ENST00000422958 438 ntBASIC19.7■□□□□ 0.74
RRP8O43159 AC012618.2-201ENST00000428058 849 ntBASIC19.7■□□□□ 0.74
RRP8O43159 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.7■□□□□ 0.74
RRP8O43159 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.7■□□□□ 0.74
RRP8O43159 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RRP8O43159 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RRP8O43159 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RRP8O43159 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.7■□□□□ 0.74
RRP8O43159 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RRP8O43159 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RRP8O43159 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.7■□□□□ 0.74
RRP8O43159 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
RRP8O43159 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RRP8O43159 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RRP8O43159 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RRP8O43159 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RRP8O43159 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RRP8O43159 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.69■□□□□ 0.74
RRP8O43159 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RRP8O43159 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RRP8O43159 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RRP8O43159 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.69■□□□□ 0.74
RRP8O43159 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.69■□□□□ 0.74
RRP8O43159 AC133561.5-201ENST00000635547 218 ntBASIC19.69■□□□□ 0.74
RRP8O43159 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.69■□□□□ 0.74
RRP8O43159 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RRP8O43159 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RRP8O43159 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.68■□□□□ 0.74
RRP8O43159 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RRP8O43159 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
RRP8O43159 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RRP8O43159 AC004812.2-201ENST00000611079 2094 ntBASIC19.68■□□□□ 0.74
RRP8O43159 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RRP8O43159 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
RRP8O43159 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
RRP8O43159 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RRP8O43159 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RRP8O43159 CDV3P1-201ENST00000471403 739 ntBASIC19.68■□□□□ 0.74
RRP8O43159 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
RRP8O43159 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.68■□□□□ 0.74
RRP8O43159 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.68■□□□□ 0.74
RRP8O43159 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.68■□□□□ 0.74
RRP8O43159 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.68■□□□□ 0.74
RRP8O43159 FAM21FP-204ENST00000608637 956 ntBASIC19.68■□□□□ 0.74
RRP8O43159 AC069544.1-201ENST00000609399 999 ntBASIC19.68■□□□□ 0.74
RRP8O43159 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RRP8O43159 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RRP8O43159 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
RRP8O43159 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
RRP8O43159 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RRP8O43159 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.67■□□□□ 0.74
RRP8O43159 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RRP8O43159 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RRP8O43159 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RRP8O43159 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RRP8O43159 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
RRP8O43159 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.67■□□□□ 0.74
RRP8O43159 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RRP8O43159 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RRP8O43159 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.67■□□□□ 0.74
RRP8O43159 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.67■□□□□ 0.74
RRP8O43159 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.67■□□□□ 0.74
RRP8O43159 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
RRP8O43159 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
RRP8O43159 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RRP8O43159 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RRP8O43159 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms