Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 BET1L-207ENST00000529614 560 ntTSL 5 BASIC24.01■■□□□ 1.43
ATP2A1O14983 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
ATP2A1O14983 ITM2C-210ENST00000620962 501 ntBASIC24.01■■□□□ 1.43
ATP2A1O14983 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
ATP2A1O14983 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC24.01■■□□□ 1.43
ATP2A1O14983 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
ATP2A1O14983 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC24■■□□□ 1.43
ATP2A1O14983 STX5-203ENST00000394690 1568 ntTSL 5 BASIC24■■□□□ 1.43
ATP2A1O14983 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC24■■□□□ 1.43
ATP2A1O14983 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
ATP2A1O14983 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
ATP2A1O14983 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC24■■□□□ 1.43
ATP2A1O14983 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC24■■□□□ 1.43
ATP2A1O14983 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC24■■□□□ 1.43
ATP2A1O14983 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC24■■□□□ 1.43
ATP2A1O14983 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC24■■□□□ 1.43
ATP2A1O14983 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC24■■□□□ 1.43
ATP2A1O14983 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC24■■□□□ 1.43
ATP2A1O14983 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.99■■□□□ 1.43
ATP2A1O14983 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.99■■□□□ 1.43
ATP2A1O14983 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ATP2A1O14983 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.99■■□□□ 1.43
ATP2A1O14983 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
ATP2A1O14983 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
ATP2A1O14983 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
ATP2A1O14983 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
ATP2A1O14983 CDV3P1-201ENST00000471403 739 ntBASIC23.99■■□□□ 1.43
ATP2A1O14983 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
ATP2A1O14983 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.99■■□□□ 1.43
ATP2A1O14983 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ATP2A1O14983 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.99■■□□□ 1.43
ATP2A1O14983 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ATP2A1O14983 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
ATP2A1O14983 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ATP2A1O14983 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ATP2A1O14983 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
ATP2A1O14983 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.98■■□□□ 1.43
ATP2A1O14983 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
ATP2A1O14983 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ATP2A1O14983 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ATP2A1O14983 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
ATP2A1O14983 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ATP2A1O14983 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ATP2A1O14983 SAPCD2P1-201ENST00000395413 1184 ntBASIC23.98■■□□□ 1.43
ATP2A1O14983 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ATP2A1O14983 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
ATP2A1O14983 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC23.98■■□□□ 1.43
ATP2A1O14983 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC23.98■■□□□ 1.43
ATP2A1O14983 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC23.98■■□□□ 1.43
ATP2A1O14983 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ATP2A1O14983 AC066615.1-201ENST00000640911 628 ntBASIC23.98■■□□□ 1.43
ATP2A1O14983 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ATP2A1O14983 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
ATP2A1O14983 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC23.98■■□□□ 1.43
ATP2A1O14983 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
ATP2A1O14983 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.97■■□□□ 1.43
ATP2A1O14983 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ATP2A1O14983 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
ATP2A1O14983 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.97■■□□□ 1.43
ATP2A1O14983 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
ATP2A1O14983 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC23.97■■□□□ 1.43
ATP2A1O14983 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.97■■□□□ 1.43
ATP2A1O14983 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
ATP2A1O14983 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ATP2A1O14983 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.96■■□□□ 1.43
ATP2A1O14983 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
ATP2A1O14983 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
ATP2A1O14983 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ATP2A1O14983 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
ATP2A1O14983 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
ATP2A1O14983 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
ATP2A1O14983 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
ATP2A1O14983 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ATP2A1O14983 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ATP2A1O14983 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC23.96■■□□□ 1.43
ATP2A1O14983 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC23.96■■□□□ 1.43
ATP2A1O14983 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC23.96■■□□□ 1.43
ATP2A1O14983 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC23.96■■□□□ 1.43
ATP2A1O14983 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
ATP2A1O14983 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
ATP2A1O14983 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.96■■□□□ 1.43
ATP2A1O14983 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
ATP2A1O14983 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ATP2A1O14983 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
ATP2A1O14983 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
ATP2A1O14983 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC23.95■■□□□ 1.42
ATP2A1O14983 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
ATP2A1O14983 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
ATP2A1O14983 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC23.95■■□□□ 1.42
ATP2A1O14983 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
ATP2A1O14983 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
ATP2A1O14983 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
ATP2A1O14983 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
ATP2A1O14983 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
ATP2A1O14983 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
ATP2A1O14983 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.94■■□□□ 1.42
ATP2A1O14983 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ATP2A1O14983 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
ATP2A1O14983 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
ATP2A1O14983 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC23.94■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms