Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM38O00635 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM38O00635 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.98■□□□□ 0.95
TRIM38O00635 MYCNOS-205ENST00000641950 531 ntBASIC20.98■□□□□ 0.95
TRIM38O00635 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.98■□□□□ 0.95
TRIM38O00635 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM38O00635 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM38O00635 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM38O00635 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM38O00635 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM38O00635 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TRIM38O00635 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM38O00635 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM38O00635 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM38O00635 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM38O00635 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM38O00635 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.97■□□□□ 0.95
TRIM38O00635 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM38O00635 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM38O00635 AC079089.2-201ENST00000531211 1277 ntBASIC20.97■□□□□ 0.95
TRIM38O00635 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM38O00635 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TRIM38O00635 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM38O00635 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.97■□□□□ 0.95
TRIM38O00635 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM38O00635 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TRIM38O00635 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM38O00635 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TRIM38O00635 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TRIM38O00635 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.96■□□□□ 0.95
TRIM38O00635 GUSBP6-202ENST00000438529 1198 ntBASIC20.96■□□□□ 0.95
TRIM38O00635 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.96■□□□□ 0.95
TRIM38O00635 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.96■□□□□ 0.95
TRIM38O00635 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM38O00635 CD99P1-205ENST00000527459 561 ntBASIC20.96■□□□□ 0.95
TRIM38O00635 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.96■□□□□ 0.95
TRIM38O00635 SLC7A5P2-201ENST00000553010 536 ntBASIC20.96■□□□□ 0.95
TRIM38O00635 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM38O00635 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM38O00635 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM38O00635 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM38O00635 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM38O00635 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM38O00635 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TRIM38O00635 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM38O00635 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM38O00635 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.95■□□□□ 0.95
TRIM38O00635 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM38O00635 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM38O00635 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM38O00635 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
TRIM38O00635 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
TRIM38O00635 LINC01960-201ENST00000563759 1884 ntBASIC20.95■□□□□ 0.94
TRIM38O00635 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.95■□□□□ 0.94
TRIM38O00635 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM38O00635 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.95■□□□□ 0.94
TRIM38O00635 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.95■□□□□ 0.94
TRIM38O00635 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.95■□□□□ 0.94
TRIM38O00635 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.95■□□□□ 0.94
TRIM38O00635 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM38O00635 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM38O00635 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM38O00635 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM38O00635 AC005229.4-201ENST00000610085 2198 ntBASIC20.95■□□□□ 0.94
TRIM38O00635 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM38O00635 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM38O00635 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM38O00635 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM38O00635 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.94■□□□□ 0.94
TRIM38O00635 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.94■□□□□ 0.94
TRIM38O00635 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.94■□□□□ 0.94
TRIM38O00635 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.94■□□□□ 0.94
TRIM38O00635 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM38O00635 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM38O00635 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.94■□□□□ 0.94
TRIM38O00635 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
TRIM38O00635 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM38O00635 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
TRIM38O00635 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TRIM38O00635 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM38O00635 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM38O00635 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM38O00635 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM38O00635 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM38O00635 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM38O00635 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM38O00635 AL138781.1-201ENST00000566567 1274 ntBASIC20.93■□□□□ 0.94
TRIM38O00635 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM38O00635 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM38O00635 TMEM191A-211ENST00000637163 1067 ntBASIC20.93■□□□□ 0.94
TRIM38O00635 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
TRIM38O00635 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM38O00635 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM38O00635 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM38O00635 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
TRIM38O00635 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM38O00635 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM38O00635 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.92■□□□□ 0.94
TRIM38O00635 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
TRIM38O00635 CNN2P6-201ENST00000439038 900 ntBASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms