Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TAF4O00268 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.38■□□□□ 0.85
TAF4O00268 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TAF4O00268 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TAF4O00268 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
TAF4O00268 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TAF4O00268 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TAF4O00268 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
TAF4O00268 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TAF4O00268 UBE2SP1-201ENST00000450587 669 ntBASIC20.38■□□□□ 0.85
TAF4O00268 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.38■□□□□ 0.85
TAF4O00268 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.38■□□□□ 0.85
TAF4O00268 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TAF4O00268 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TAF4O00268 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.38■□□□□ 0.85
TAF4O00268 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TAF4O00268 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TAF4O00268 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TAF4O00268 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.38■□□□□ 0.85
TAF4O00268 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TAF4O00268 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TAF4O00268 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.37■□□□□ 0.85
TAF4O00268 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TAF4O00268 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TAF4O00268 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.37■□□□□ 0.85
TAF4O00268 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.37■□□□□ 0.85
TAF4O00268 AL137060.1-201ENST00000618151 2648 ntBASIC20.37■□□□□ 0.85
TAF4O00268 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TAF4O00268 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
TAF4O00268 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TAF4O00268 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.37■□□□□ 0.85
TAF4O00268 BX276092.2-201ENST00000417668 665 ntBASIC20.37■□□□□ 0.85
TAF4O00268 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.37■□□□□ 0.85
TAF4O00268 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TAF4O00268 MIR4497-201ENST00000583208 89 ntBASIC20.37■□□□□ 0.85
TAF4O00268 AC013268.1-206ENST00000638368 961 ntBASIC20.37■□□□□ 0.85
TAF4O00268 AC112229.1-201ENST00000639295 961 ntBASIC20.37■□□□□ 0.85
TAF4O00268 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TAF4O00268 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TAF4O00268 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
TAF4O00268 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.37■□□□□ 0.85
TAF4O00268 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.36■□□□□ 0.85
TAF4O00268 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
TAF4O00268 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TAF4O00268 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.36■□□□□ 0.85
TAF4O00268 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TAF4O00268 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
TAF4O00268 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TAF4O00268 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TAF4O00268 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TAF4O00268 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TAF4O00268 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.36■□□□□ 0.85
TAF4O00268 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.36■□□□□ 0.85
TAF4O00268 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.36■□□□□ 0.85
TAF4O00268 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.36■□□□□ 0.85
TAF4O00268 KRT18P21-201ENST00000515767 1272 ntBASIC20.36■□□□□ 0.85
TAF4O00268 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.36■□□□□ 0.85
TAF4O00268 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TAF4O00268 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.36■□□□□ 0.85
TAF4O00268 OR10C1-204ENST00000622521 1039 ntBASIC20.36■□□□□ 0.85
TAF4O00268 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.36■□□□□ 0.85
TAF4O00268 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TAF4O00268 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
TAF4O00268 OXCT2P1-201ENST00000447263 1535 ntBASIC20.36■□□□□ 0.85
TAF4O00268 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TAF4O00268 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.36■□□□□ 0.85
TAF4O00268 RNF165-205ENST00000588679 2904 ntBASIC20.36■□□□□ 0.85
TAF4O00268 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.35■□□□□ 0.85
TAF4O00268 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TAF4O00268 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TAF4O00268 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.35■□□□□ 0.85
TAF4O00268 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TAF4O00268 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TAF4O00268 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TAF4O00268 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TAF4O00268 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TAF4O00268 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TAF4O00268 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.35■□□□□ 0.85
TAF4O00268 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
TAF4O00268 AL512625.2-201ENST00000417533 625 ntBASIC20.35■□□□□ 0.85
TAF4O00268 TERF1P5-201ENST00000477545 1207 ntBASIC20.35■□□□□ 0.85
TAF4O00268 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.35■□□□□ 0.85
TAF4O00268 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TAF4O00268 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TAF4O00268 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TAF4O00268 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TAF4O00268 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TAF4O00268 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TAF4O00268 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.34■□□□□ 0.85
TAF4O00268 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.34■□□□□ 0.85
TAF4O00268 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.34■□□□□ 0.85
TAF4O00268 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TAF4O00268 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TAF4O00268 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.34■□□□□ 0.85
TAF4O00268 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TAF4O00268 AC026366.1-201ENST00000488803 879 ntBASIC20.34■□□□□ 0.85
TAF4O00268 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.34■□□□□ 0.85
TAF4O00268 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.34■□□□□ 0.85
TAF4O00268 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.34■□□□□ 0.85
TAF4O00268 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms