Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC120498.10-201ENST00000621827 505 ntBASIC19.05■□□□□ 0.64
NPIPA2E9PIF3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
NPIPA2E9PIF3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
NPIPA2E9PIF3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPA2E9PIF3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPA2E9PIF3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPA2E9PIF3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPA2E9PIF3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NPIPA2E9PIF3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPIPA2E9PIF3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.04■□□□□ 0.64
NPIPA2E9PIF3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NPIPA2E9PIF3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NPIPA2E9PIF3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPIPA2E9PIF3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPIPA2E9PIF3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPIPA2E9PIF3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPIPA2E9PIF3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
NPIPA2E9PIF3 SLC29A4P1-201ENST00000398760 971 ntBASIC19.04■□□□□ 0.64
NPIPA2E9PIF3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.04■□□□□ 0.64
NPIPA2E9PIF3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.04■□□□□ 0.64
NPIPA2E9PIF3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.04■□□□□ 0.64
NPIPA2E9PIF3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.04■□□□□ 0.64
NPIPA2E9PIF3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NPIPA2E9PIF3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.04■□□□□ 0.64
NPIPA2E9PIF3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NPIPA2E9PIF3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPIPA2E9PIF3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPIPA2E9PIF3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPIPA2E9PIF3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NPIPA2E9PIF3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPIPA2E9PIF3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.03■□□□□ 0.64
NPIPA2E9PIF3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.03■□□□□ 0.64
NPIPA2E9PIF3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.03■□□□□ 0.64
NPIPA2E9PIF3 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.03■□□□□ 0.64
NPIPA2E9PIF3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPIPA2E9PIF3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPIPA2E9PIF3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
NPIPA2E9PIF3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPIPA2E9PIF3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
NPIPA2E9PIF3 TERF1P5-201ENST00000477545 1207 ntBASIC19.03■□□□□ 0.64
NPIPA2E9PIF3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NPIPA2E9PIF3 SLC7A5P1-201ENST00000568957 537 ntBASIC19.03■□□□□ 0.64
NPIPA2E9PIF3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.03■□□□□ 0.64
NPIPA2E9PIF3 AC013268.1-206ENST00000638368 961 ntBASIC19.03■□□□□ 0.64
NPIPA2E9PIF3 AC112229.1-201ENST00000639295 961 ntBASIC19.03■□□□□ 0.64
NPIPA2E9PIF3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
NPIPA2E9PIF3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPIPA2E9PIF3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NPIPA2E9PIF3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.03■□□□□ 0.64
NPIPA2E9PIF3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPIPA2E9PIF3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPIPA2E9PIF3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPIPA2E9PIF3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.02■□□□□ 0.64
NPIPA2E9PIF3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.02■□□□□ 0.64
NPIPA2E9PIF3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPIPA2E9PIF3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
NPIPA2E9PIF3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NPIPA2E9PIF3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NPIPA2E9PIF3 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.02■□□□□ 0.64
NPIPA2E9PIF3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.02■□□□□ 0.64
NPIPA2E9PIF3 AF201337.1-201ENST00000520239 748 ntBASIC19.02■□□□□ 0.64
NPIPA2E9PIF3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
NPIPA2E9PIF3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.02■□□□□ 0.64
NPIPA2E9PIF3 AC105036.2-201ENST00000569468 176 ntBASIC19.02■□□□□ 0.64
NPIPA2E9PIF3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPIPA2E9PIF3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.02■□□□□ 0.64
NPIPA2E9PIF3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPIPA2E9PIF3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
NPIPA2E9PIF3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NPIPA2E9PIF3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.02■□□□□ 0.63
NPIPA2E9PIF3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPIPA2E9PIF3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPIPA2E9PIF3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPIPA2E9PIF3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPIPA2E9PIF3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPIPA2E9PIF3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPIPA2E9PIF3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.01■□□□□ 0.63
NPIPA2E9PIF3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.01■□□□□ 0.63
NPIPA2E9PIF3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
NPIPA2E9PIF3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NPIPA2E9PIF3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.01■□□□□ 0.63
NPIPA2E9PIF3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPIPA2E9PIF3 FBXW4P1-201ENST00000426721 2239 ntBASIC19.01■□□□□ 0.63
NPIPA2E9PIF3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
NPIPA2E9PIF3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19■□□□□ 0.63
NPIPA2E9PIF3 AC026471.6-201ENST00000622954 1905 ntBASIC19■□□□□ 0.63
NPIPA2E9PIF3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
NPIPA2E9PIF3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPIPA2E9PIF3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
NPIPA2E9PIF3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19■□□□□ 0.63
NPIPA2E9PIF3 AC142086.2-201ENST00000569753 217 ntBASIC19■□□□□ 0.63
NPIPA2E9PIF3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19■□□□□ 0.63
NPIPA2E9PIF3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPIPA2E9PIF3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
NPIPA2E9PIF3 LINC00565-201ENST00000562710 2331 ntBASIC19■□□□□ 0.63
NPIPA2E9PIF3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NPIPA2E9PIF3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPIPA2E9PIF3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPIPA2E9PIF3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.99■□□□□ 0.63
NPIPA2E9PIF3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms