Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.54■□□□□ 0.88
C4orf47A7E2U8 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.54■□□□□ 0.88
C4orf47A7E2U8 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C4orf47A7E2U8 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
C4orf47A7E2U8 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C4orf47A7E2U8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C4orf47A7E2U8 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
C4orf47A7E2U8 PNMA6B-201ENST00000538162 1200 ntBASIC20.54■□□□□ 0.88
C4orf47A7E2U8 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.54■□□□□ 0.88
C4orf47A7E2U8 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
C4orf47A7E2U8 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
C4orf47A7E2U8 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
C4orf47A7E2U8 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C4orf47A7E2U8 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
C4orf47A7E2U8 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.53■□□□□ 0.88
C4orf47A7E2U8 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C4orf47A7E2U8 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
C4orf47A7E2U8 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
C4orf47A7E2U8 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
C4orf47A7E2U8 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
C4orf47A7E2U8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
C4orf47A7E2U8 BX088651.1-201ENST00000540551 451 ntBASIC20.53■□□□□ 0.88
C4orf47A7E2U8 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.53■□□□□ 0.88
C4orf47A7E2U8 AC233263.1-201ENST00000578059 224 ntBASIC20.53■□□□□ 0.88
C4orf47A7E2U8 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
C4orf47A7E2U8 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
C4orf47A7E2U8 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C4orf47A7E2U8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
C4orf47A7E2U8 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
C4orf47A7E2U8 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
C4orf47A7E2U8 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.52■□□□□ 0.88
C4orf47A7E2U8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
C4orf47A7E2U8 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
C4orf47A7E2U8 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.52■□□□□ 0.88
C4orf47A7E2U8 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.52■□□□□ 0.88
C4orf47A7E2U8 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
C4orf47A7E2U8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.52■□□□□ 0.88
C4orf47A7E2U8 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
C4orf47A7E2U8 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
C4orf47A7E2U8 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
C4orf47A7E2U8 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.52■□□□□ 0.88
C4orf47A7E2U8 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
C4orf47A7E2U8 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.52■□□□□ 0.88
C4orf47A7E2U8 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
C4orf47A7E2U8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
C4orf47A7E2U8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C4orf47A7E2U8 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.51■□□□□ 0.87
C4orf47A7E2U8 AC092368.3-202ENST00000574180 1591 ntBASIC20.51■□□□□ 0.87
C4orf47A7E2U8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
C4orf47A7E2U8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
C4orf47A7E2U8 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
C4orf47A7E2U8 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.51■□□□□ 0.87
C4orf47A7E2U8 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
C4orf47A7E2U8 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.51■□□□□ 0.87
C4orf47A7E2U8 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C4orf47A7E2U8 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.51■□□□□ 0.87
C4orf47A7E2U8 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
C4orf47A7E2U8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.51■□□□□ 0.87
C4orf47A7E2U8 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.51■□□□□ 0.87
C4orf47A7E2U8 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.51■□□□□ 0.87
C4orf47A7E2U8 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.51■□□□□ 0.87
C4orf47A7E2U8 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C4orf47A7E2U8 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
C4orf47A7E2U8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C4orf47A7E2U8 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.51■□□□□ 0.87
C4orf47A7E2U8 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C4orf47A7E2U8 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
C4orf47A7E2U8 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
C4orf47A7E2U8 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C4orf47A7E2U8 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
C4orf47A7E2U8 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.5■□□□□ 0.87
C4orf47A7E2U8 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
C4orf47A7E2U8 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
C4orf47A7E2U8 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
C4orf47A7E2U8 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
C4orf47A7E2U8 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
C4orf47A7E2U8 AC068473.5-201ENST00000616428 2072 ntBASIC20.49■□□□□ 0.87
C4orf47A7E2U8 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.49■□□□□ 0.87
C4orf47A7E2U8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.49■□□□□ 0.87
C4orf47A7E2U8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
C4orf47A7E2U8 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.49■□□□□ 0.87
C4orf47A7E2U8 AC061975.6-201ENST00000579045 1553 ntBASIC20.49■□□□□ 0.87
C4orf47A7E2U8 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
C4orf47A7E2U8 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
C4orf47A7E2U8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
C4orf47A7E2U8 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.49■□□□□ 0.87
C4orf47A7E2U8 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
C4orf47A7E2U8 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
C4orf47A7E2U8 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.48■□□□□ 0.87
C4orf47A7E2U8 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.48■□□□□ 0.87
C4orf47A7E2U8 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
C4orf47A7E2U8 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.48■□□□□ 0.87
C4orf47A7E2U8 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
C4orf47A7E2U8 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
C4orf47A7E2U8 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
C4orf47A7E2U8 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
C4orf47A7E2U8 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
C4orf47A7E2U8 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.48■□□□□ 0.87
C4orf47A7E2U8 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.48■□□□□ 0.87
C4orf47A7E2U8 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms