Protein–RNA interactions for Protein: A0A0B7P3V8

TY4B-P, Transposon Ty4-P Gag-Pol polyprotein, yeast

Predictions only

Length 1,104 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
TY4B-P	A0A0B7P3V8	YGR153W	YGR153W	654 nt		4.61	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	FMC1	YIL098C	468 nt		4.61	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	MRPL20	YKR085C	588 nt		4.61	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	HTA2	YBL003C	399 nt		4.61	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	IDH2	YOR136W	1110 nt		4.61	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	AFT2	YPL202C	1251 nt		4.61	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	YBR141W-A	YBR141W-A	96 nt		4.61	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	SPE1	YKL184W	1401 nt		4.61	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	JHD2	YJR119C	2187 nt		4.61	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	NCS2	YNL119W	1482 nt		4.61	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	SMP3	YOR149C	1551 nt		4.61	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	RRI2	YOL117W	1938 nt		4.6	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	ATM1	YMR301C	2073 nt		4.6	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	SPT23	YKL020C	3249 nt		4.6	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	SHE4	YOR035C	2370 nt		4.6	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	ARF2	YDL137W	546 nt		4.6	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	SDH7	YDR511W	402 nt		4.6	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	YKL069W	YKL069W	543 nt		4.6	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	RIM9	YMR063W	720 nt		4.6	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	ICY1	YMR195W	384 nt		4.6	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	PAH1	YMR165C	2589 nt		4.6	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	SDS23	YGL056C	1584 nt		4.6	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	YDR537C	YDR537C	606 nt		4.59	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	TUB2	YFL037W	1374 nt		4.59	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	GYP6	YJL044C	1377 nt		4.59	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	YEH2	YLR020C	1617 nt		4.59	□□□□□ -1.67
TY4B-P	A0A0B7P3V8	CTM1	YHR109W	1758 nt		4.58	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	VID28	YIL017C	2766 nt		4.58	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	YIL046W-A	YIL046W-A	165 nt		4.58	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	YMR013C-A	YMR013C-A	150 nt		4.58	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	VTI1	YMR197C	654 nt		4.58	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	HHT2	YNL031C	411 nt		4.58	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	IMP4	YNL075W	873 nt		4.58	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	YNL276C	YNL276C	396 nt		4.58	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	ERP4	YOR016C	624 nt		4.58	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	YPK9	YOR291W	4419 nt		4.58	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	GRS2	YPR081C	1857 nt		4.58	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	TPD3	YAL016W	1908 nt		4.57	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	TRF5	YNL299W	1929 nt		4.57	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	RPS14A	YCR031C	414 nt		4.57	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	VOA1	YGR106C	798 nt		4.57	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	RPS24B	YIL069C	408 nt		4.57	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	PKR1	YMR123W	369 nt		4.57	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	GRE2	YOL151W	1029 nt		4.57	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	CTR86	YCR054C	1692 nt		4.57	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	MCD4	YKL165C	2760 nt		4.57	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	HRR25	YPL204W	1485 nt		4.56	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	SSF1	YHR066W	1362 nt		4.56	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	FMP25	YLR077W	1752 nt		4.56	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	YDL009C	YDL009C	324 nt		4.56	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	RPS13	YDR064W	456 nt		4.56	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	ARO2	YGL148W	1131 nt		4.56	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	YGR053C	YGR053C	852 nt		4.56	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	IDP2	YLR174W	1239 nt		4.56	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	YBL039W-B	YBL039W-B	180 nt		4.56	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	YNL296W	YNL296W	315 nt		4.56	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	RPL18A	YOL120C	561 nt		4.56	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	YOR022C	YOR022C	2148 nt		4.56	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	STE5	YDR103W	2754 nt		4.56	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	PEP7	YDR323C	1548 nt		4.56	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	PUB1	YNL016W	1362 nt		4.55	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	VHS3	YOR054C	2025 nt		4.55	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	TGL3	YMR313C	1929 nt		4.55	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	YDR102C	YDR102C	333 nt		4.55	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	YDR406W-A	YDR406W-A	246 nt		4.55	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	YFL015C	YFL015C	495 nt		4.55	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	VPS29	YHR012W	849 nt		4.55	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	RGI2	YIL057C	495 nt		4.55	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	tX(XXX)D	tX(XXX)D	100 nt		4.55	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	RPL39	YJL189W	156 nt		4.55	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	YMR046W-A	YMR046W-A	129 nt		4.55	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	SKG3	YLR187W	3081 nt		4.55	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	APL4	YPR029C	2499 nt		4.54	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	SEC59	YMR013C	1560 nt		4.54	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	YER038W-A	YER038W-A	381 nt		4.54	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	tR(ACG)J	tR(ACG)J	73 nt		4.54	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	TDA8	YAL064C-A	381 nt		4.54	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	snR36	snR36	182 nt		4.54	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	MNN4	YKL201C	3537 nt		4.54	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	AVT7	YIL088C	1473 nt		4.54	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	GPI17	YDR434W	1605 nt		4.54	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	LYS9	YNR050C	1341 nt		4.53	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	BI4	Q0120	1917 nt		4.53	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	RTR2	YDR066C	591 nt		4.53	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	YDR262W	YDR262W	819 nt		4.53	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	GPP1	YIL053W	753 nt		4.53	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	YLR031W	YLR031W	561 nt		4.53	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	RDN58-1	RDN58-1	158 nt		4.53	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	RDN58-2	RDN58-2	158 nt		4.53	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	ISF1	YMR081C	1017 nt		4.53	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	YNR042W	YNR042W	429 nt		4.53	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	VAM10	YOR068C	345 nt		4.53	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	MNR2	YKL064W	2910 nt		4.53	□□□□□ -1.68
TY4B-P	A0A0B7P3V8	KIP3	YGL216W	2418 nt		4.52	□□□□□ -1.69
TY4B-P	A0A0B7P3V8	PRS5	YOL061W	1491 nt		4.52	□□□□□ -1.69
TY4B-P	A0A0B7P3V8	YRM1	YOR172W	2361 nt		4.52	□□□□□ -1.69
TY4B-P	A0A0B7P3V8	CPR5	YDR304C	678 nt		4.52	□□□□□ -1.69
TY4B-P	A0A0B7P3V8	MFA1	YDR461W	111 nt		4.52	□□□□□ -1.69
TY4B-P	A0A0B7P3V8	FMP10	YER182W	735 nt		4.52	□□□□□ -1.69
TY4B-P	A0A0B7P3V8	RNR4	YGR180C	1038 nt		4.52	□□□□□ -1.69

Retrieved 100 of 7,029 protein–RNA pairs in 61.5 ms