Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 VPS53-216ENST00000574029 585 ntTSL 4 BASIC15.73■□□□□ 0.11
TRAV25A0A0B4J276 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV25A0A0B4J276 AC010536.3-201ENST00000620306 533 ntBASIC15.73■□□□□ 0.11
TRAV25A0A0B4J276 AC231657.2-201ENST00000624556 255 ntBASIC15.73■□□□□ 0.11
TRAV25A0A0B4J276 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
TRAV25A0A0B4J276 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
TRAV25A0A0B4J276 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC15.73■□□□□ 0.11
TRAV25A0A0B4J276 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV25A0A0B4J276 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV25A0A0B4J276 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV25A0A0B4J276 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV25A0A0B4J276 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV25A0A0B4J276 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV25A0A0B4J276 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TRAV25A0A0B4J276 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV25A0A0B4J276 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV25A0A0B4J276 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV25A0A0B4J276 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV25A0A0B4J276 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TRAV25A0A0B4J276 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV25A0A0B4J276 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV25A0A0B4J276 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV25A0A0B4J276 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TRAV25A0A0B4J276 MFSD11-216ENST00000590393 1141 ntBASIC15.72■□□□□ 0.11
TRAV25A0A0B4J276 AC080038.1-201ENST00000611274 1154 ntBASIC15.72■□□□□ 0.11
TRAV25A0A0B4J276 AC013268.1-206ENST00000638368 961 ntBASIC15.72■□□□□ 0.11
TRAV25A0A0B4J276 AC112229.1-201ENST00000639295 961 ntBASIC15.72■□□□□ 0.11
TRAV25A0A0B4J276 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV25A0A0B4J276 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV25A0A0B4J276 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV25A0A0B4J276 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAV25A0A0B4J276 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV25A0A0B4J276 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV25A0A0B4J276 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV25A0A0B4J276 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAV25A0A0B4J276 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV25A0A0B4J276 TERF1P5-201ENST00000477545 1207 ntBASIC15.71■□□□□ 0.11
TRAV25A0A0B4J276 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAV25A0A0B4J276 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAV25A0A0B4J276 DLX3-202ENST00000512495 834 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV25A0A0B4J276 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TRAV25A0A0B4J276 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC15.71■□□□□ 0.11
TRAV25A0A0B4J276 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV25A0A0B4J276 ME2-206ENST00000638410 2289 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAV25A0A0B4J276 ME2-210ENST00000639255 2262 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAV25A0A0B4J276 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV25A0A0B4J276 MYB-221ENST00000527615 2381 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAV25A0A0B4J276 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV25A0A0B4J276 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV25A0A0B4J276 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV25A0A0B4J276 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRAV25A0A0B4J276 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TRAV25A0A0B4J276 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV25A0A0B4J276 PARN-205ENST00000539279 1557 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV25A0A0B4J276 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV25A0A0B4J276 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV25A0A0B4J276 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV25A0A0B4J276 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV25A0A0B4J276 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV25A0A0B4J276 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV25A0A0B4J276 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV25A0A0B4J276 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV25A0A0B4J276 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV25A0A0B4J276 AC007322.4-201ENST00000509611 723 ntBASIC15.7■□□□□ 0.1
TRAV25A0A0B4J276 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV25A0A0B4J276 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV25A0A0B4J276 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TRAV25A0A0B4J276 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV25A0A0B4J276 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRAV25A0A0B4J276 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC15.7■□□□□ 0.1
TRAV25A0A0B4J276 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV25A0A0B4J276 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV25A0A0B4J276 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV25A0A0B4J276 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TRAV25A0A0B4J276 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV25A0A0B4J276 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV25A0A0B4J276 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV25A0A0B4J276 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV25A0A0B4J276 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV25A0A0B4J276 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV25A0A0B4J276 RBM17P2-201ENST00000616397 1405 ntBASIC15.69■□□□□ 0.1
TRAV25A0A0B4J276 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV25A0A0B4J276 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TRAV25A0A0B4J276 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV25A0A0B4J276 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV25A0A0B4J276 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV25A0A0B4J276 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC15.69■□□□□ 0.1
TRAV25A0A0B4J276 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV25A0A0B4J276 CD44-222ENST00000526025 1052 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV25A0A0B4J276 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV25A0A0B4J276 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.69■□□□□ 0.1
TRAV25A0A0B4J276 DUX4L16-201ENST00000555130 1264 ntBASIC15.69■□□□□ 0.1
TRAV25A0A0B4J276 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV25A0A0B4J276 FBXW4P1-201ENST00000426721 2239 ntBASIC15.69■□□□□ 0.1
TRAV25A0A0B4J276 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV25A0A0B4J276 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV25A0A0B4J276 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
TRAV25A0A0B4J276 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV25A0A0B4J276 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV25A0A0B4J276 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms