Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV41A0A0B4J266 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV41A0A0B4J266 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV41A0A0B4J266 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAV41A0A0B4J266 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV41A0A0B4J266 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
TRAV41A0A0B4J266 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV41A0A0B4J266 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV41A0A0B4J266 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAV41A0A0B4J266 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV41A0A0B4J266 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.47■□□□□ 0.23
TRAV41A0A0B4J266 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRAV41A0A0B4J266 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV41A0A0B4J266 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV41A0A0B4J266 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRAV41A0A0B4J266 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAV41A0A0B4J266 AL137784.2-201ENST00000607332 1000 ntBASIC16.47■□□□□ 0.23
TRAV41A0A0B4J266 MYCNOS-205ENST00000641950 531 ntBASIC16.47■□□□□ 0.23
TRAV41A0A0B4J266 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRAV41A0A0B4J266 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV41A0A0B4J266 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
TRAV41A0A0B4J266 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV41A0A0B4J266 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRAV41A0A0B4J266 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV41A0A0B4J266 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV41A0A0B4J266 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TRAV41A0A0B4J266 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV41A0A0B4J266 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV41A0A0B4J266 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV41A0A0B4J266 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV41A0A0B4J266 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRAV41A0A0B4J266 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAV41A0A0B4J266 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRAV41A0A0B4J266 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRAV41A0A0B4J266 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.46■□□□□ 0.23
TRAV41A0A0B4J266 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.46■□□□□ 0.23
TRAV41A0A0B4J266 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV41A0A0B4J266 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV41A0A0B4J266 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAV41A0A0B4J266 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV41A0A0B4J266 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV41A0A0B4J266 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV41A0A0B4J266 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV41A0A0B4J266 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
TRAV41A0A0B4J266 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
TRAV41A0A0B4J266 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV41A0A0B4J266 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV41A0A0B4J266 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV41A0A0B4J266 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV41A0A0B4J266 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV41A0A0B4J266 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV41A0A0B4J266 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV41A0A0B4J266 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.45■□□□□ 0.22
TRAV41A0A0B4J266 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.45■□□□□ 0.22
TRAV41A0A0B4J266 AC006015.1-201ENST00000429970 570 ntBASIC16.45■□□□□ 0.22
TRAV41A0A0B4J266 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.45■□□□□ 0.22
TRAV41A0A0B4J266 SLC7A5P1-201ENST00000568957 537 ntBASIC16.45■□□□□ 0.22
TRAV41A0A0B4J266 AC092666.2-201ENST00000613287 246 ntBASIC16.45■□□□□ 0.22
TRAV41A0A0B4J266 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAV41A0A0B4J266 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAV41A0A0B4J266 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV41A0A0B4J266 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV41A0A0B4J266 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV41A0A0B4J266 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV41A0A0B4J266 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV41A0A0B4J266 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TRAV41A0A0B4J266 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV41A0A0B4J266 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV41A0A0B4J266 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV41A0A0B4J266 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV41A0A0B4J266 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV41A0A0B4J266 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV41A0A0B4J266 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV41A0A0B4J266 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TRAV41A0A0B4J266 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV41A0A0B4J266 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRAV41A0A0B4J266 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV41A0A0B4J266 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.44■□□□□ 0.22
TRAV41A0A0B4J266 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV41A0A0B4J266 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRAV41A0A0B4J266 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
TRAV41A0A0B4J266 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV41A0A0B4J266 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV41A0A0B4J266 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.44■□□□□ 0.22
TRAV41A0A0B4J266 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV41A0A0B4J266 IKBKGP1-201ENST00000612193 1073 ntBASIC16.44■□□□□ 0.22
TRAV41A0A0B4J266 BID-214ENST00000617586 542 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAV41A0A0B4J266 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAV41A0A0B4J266 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV41A0A0B4J266 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV41A0A0B4J266 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC16.44■□□□□ 0.22
TRAV41A0A0B4J266 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV41A0A0B4J266 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV41A0A0B4J266 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV41A0A0B4J266 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV41A0A0B4J266 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV41A0A0B4J266 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV41A0A0B4J266 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV41A0A0B4J266 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.43■□□□□ 0.22
TRAV41A0A0B4J266 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms