Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AL357315.2-201ENST00000604667 1675 ntBASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 PRKG1-203ENST00000373980 6928 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 DIP2A-202ENST00000417564 6967 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 FLNB-214ENST00000493452 7402 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 ITGB6-205ENST00000428609 2576 ntTSL 2 BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 LINC02069-201ENST00000457449 2591 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 LINC01015-203ENST00000434657 2874 ntTSL 2 BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 MADD-205ENST00000395344 4988 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 VPS50-201ENST00000251739 1193 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 PRB4-201ENST00000279575 916 ntAPPRIS P3 TSL 5 BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 AF241726.1-201ENST00000317902 699 ntBASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 WFDC10B-201ENST00000330523 630 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 UBE2D3-206ENST00000357194 660 ntTSL 2 BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 MIR671-201ENST00000390183 118 ntBASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 RPAIN-204ENST00000405578 1083 ntTSL 2 BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 AC007179.2-205ENST00000412409 707 ntTSL 3 BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 AC011247.1-202ENST00000417039 1156 ntTSL 5 BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 DDX11L5-201ENST00000421620 654 ntBASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 RHOA-203ENST00000422781 961 ntTSL 2 BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 TM2D3-203ENST00000428002 1267 ntTSL 2 BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 AC092810.1-201ENST00000429208 1224 ntBASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 ARL17B-202ENST00000450673 743 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 AC010181.2-201ENST00000483759 482 ntTSL 3 BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 RPL6P7-201ENST00000488873 853 ntBASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 ZPLD1-204ENST00000491959 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 ANKRD33B-AS1-201ENST00000506304 522 ntTSL 5 BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 ZNF331-220ENST00000513999 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 RRN3P1-204ENST00000551901 1157 ntBASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 AC079313.1-201ENST00000552785 546 ntTSL 4 BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 FAM181A-AS1-201ENST00000554538 545 ntTSL 4 BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 AL132780.3-201ENST00000555074 835 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 LINC00524-201ENST00000556987 418 ntTSL 3 BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 AC183089.1-201ENST00000557651 889 ntBASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 AC106779.1-201ENST00000561663 1018 ntTSL 3 BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 AC040169.2-201ENST00000563242 1015 ntBASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 AC129507.2-201ENST00000572499 748 ntTSL 3 BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 LINC00907-207ENST00000591381 1291 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 AC099849.1-201ENST00000603437 466 ntBASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 ARL17B-208ENST00000622877 565 ntTSL 4 BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 AC092653.2-201ENST00000624373 513 ntBASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 AP001525.1-201ENST00000624611 236 ntBASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 CASP3-201ENST00000308394 2673 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 GNL3L-201ENST00000336470 2357 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 TTI2-202ENST00000431156 2363 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 NSUN4-209ENST00000537428 2087 ntTSL 2 BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 KAT7-202ENST00000424009 3469 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 CD33-204ENST00000436584 1494 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 BRPF3-211ENST00000534400 4254 ntTSL 5 BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 VPS18-201ENST00000220509 3895 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
NPIPA3F8WFD2 CNOT2-201ENST00000229195 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 FP700125.1-201ENST00000628622 3262 ntTSL 2 BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 C12orf77-203ENST00000623395 1516 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 YME1L1-209ENST00000613434 4127 ntTSL 2 BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 OR2A9P-204ENST00000641566 2029 ntBASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 AC004947.2-201ENST00000623092 2671 ntBASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 ACTR3C-206ENST00000613959 5142 ntBASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 ATXN7L3-201ENST00000389384 3811 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 RIMBP2-202ENST00000535703 3685 ntTSL 5 BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 HIST1H2BE-202ENST00000634910 2585 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 LHX9-203ENST00000367390 7413 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 LINC01567-201ENST00000414816 2907 ntTSL 2 BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 GEMIN2-202ENST00000308317 1420 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 ARL6IP5-203ENST00000478935 1449 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 PAQR7-201ENST00000374296 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 DHX15-201ENST00000336812 2994 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 MIR345-201ENST00000362114 98 ntBASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 GGCT-204ENST00000409390 767 ntTSL 2 BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 TUBB8P11-201ENST00000415481 1058 ntBASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 RPSAP9-201ENST00000418207 888 ntBASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 AL365356.4-201ENST00000425246 613 ntTSL 3 BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 Z82196.2-201ENST00000440858 549 ntTSL 3 BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 RN7SL100P-201ENST00000460565 293 ntBASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 AC011294.1-201ENST00000487094 844 ntTSL 3 BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 AC024022.1-201ENST00000503321 598 ntTSL 3 BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 LINC02214-201ENST00000504419 707 ntTSL 3 BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 RNA5SP411-201ENST00000516136 114 ntBASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 WBP1LP10-201ENST00000519787 364 ntBASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 PRSS58-202ENST00000552471 1123 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 ZFHX2-AS1-203ENST00000556354 931 ntTSL 3 BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 OR11G1P-201ENST00000557042 968 ntBASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 AC092720.1-201ENST00000562466 447 ntTSL 5 BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 AC032019.1-201ENST00000579100 173 ntTSL 3 BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 FAAP24-205ENST00000590281 865 ntAPPRIS P1 TSL 3 BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 HTT-AS1_2.1-201ENST00000621529 175 ntBASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 ARG1-207ENST00000640973 708 ntTSL 5 BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 CDHR4-202ENST00000412678 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 AC010547.5-201ENST00000561908 3677 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 ARHGAP40-202ENST00000373345 2841 ntAPPRIS P5 TSL 5 BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 CSF2RB-201ENST00000262825 4087 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 AC092119.2-201ENST00000616774 1491 ntBASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 EHF-202ENST00000450654 2519 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 AL356488.3-201ENST00000608574 2888 ntBASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 SIPA1L2-201ENST00000262861 6555 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 TAGAP-201ENST00000326965 3051 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 MTA3-204ENST00000406911 2041 ntAPPRIS ALT1 TSL 5 BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 LINC01672-203ENST00000432429 1686 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 AP001858.1-201ENST00000472881 1342 ntBASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 PRAMEF13-202ENST00000638454 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
NPIPA3F8WFD2 AC024257.3-201ENST00000595310 3645 ntBASIC9.51□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 1422 ms