Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC018647.2-201ENST00000605778 4200 ntBASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 PDE11A-201ENST00000286063 9275 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 ACMSD-202ENST00000392928 1307 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 AC079612.1-201ENST00000358775 3700 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 EFL1-202ENST00000359445 3470 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 HAPLN1-201ENST00000274341 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 TRPV5-201ENST00000265310 2952 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 ADSL-208ENST00000623063 4359 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 FAM238C-203ENST00000640121 3620 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
NPIPA3F8WFD2 AL360004.1-201ENST00000358748 3258 ntTSL 2 BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 COL4A6-208ENST00000538570 6528 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 SLC7A13-201ENST00000297524 1878 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 MS4A7-201ENST00000300184 1869 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 GLYAT-206ENST00000611865 1899 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 HAUS8-203ENST00000593360 3176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 PHC1P1-201ENST00000554937 3061 ntBASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 ZNF506-202ENST00000450683 1385 ntAPPRIS ALT2 TSL 4 BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 TAF8-210ENST00000494547 2402 ntTSL 5 BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 LRIF1-201ENST00000369763 3475 ntAPPRIS P3 TSL 5 BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 COL6A3-205ENST00000392004 4037 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 MED23-204ENST00000368060 4446 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 GUCY1A3-207ENST00000511108 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 NDRG1-229ENST00000537882 2975 ntTSL 2 BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 TMIGD3-201ENST00000369716 1517 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 SIGLEC10-202ENST00000353836 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 MYH13-202ENST00000418404 6067 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 NT5C1B-202ENST00000359846 2475 ntAPPRIS P4 TSL 1 (best) BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 RBM25-203ENST00000525321 2470 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 SPRR1B-201ENST00000307098 620 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 OTX2-202ENST00000408990 1082 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 FGF1-208ENST00000419524 683 ntAPPRIS P1 TSL 4 BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 FAM230B-204ENST00000421576 598 ntTSL 5 BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 FAM231A-201ENST00000434336 510 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 AC099066.3-201ENST00000434499 301 ntBASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 AL590483.2-201ENST00000440148 567 ntTSL 3 BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 MIR3681HG-207ENST00000451644 623 ntTSL 3 BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 AC073089.1-201ENST00000457546 214 ntBASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 SSR3-205ENST00000467789 1039 ntTSL 2 BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 AC022364.1-201ENST00000473753 739 ntTSL 5 BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 RPSAP38-201ENST00000475442 881 ntBASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 RPL12P33-201ENST00000485633 492 ntBASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 ZNF595-202ENST00000509152 1072 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 TRMT112P5-201ENST00000511173 334 ntBASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 AP000797.3-201ENST00000537491 548 ntTSL 4 BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 TDGF1-205ENST00000542931 1192 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 AC126755.3-201ENST00000552753 543 ntBASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 LINC01169-201ENST00000558797 833 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 B2M-208ENST00000559916 1081 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 AC090515.5-201ENST00000560378 526 ntTSL 5 BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 AC046168.1-201ENST00000561283 3814 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 ABHD17AP7-201ENST00000569060 595 ntBASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 CD226-202ENST00000577287 1009 ntTSL 3 BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 AC239868.3-201ENST00000577853 1234 ntBASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 RIT2-203ENST00000590910 870 ntTSL 5 BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 AC008878.1-202ENST00000599312 382 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 NDUFB1-206ENST00000605997 336 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 AC124076.1-201ENST00000611470 608 ntBASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 Metazoa_SRP.92-201ENST00000613789 329 ntBASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 ZNF195-229ENST00000618467 440 ntTSL 5 BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 FAM231C-201ENST00000624031 510 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 AP006248.4-201ENST00000624433 688 ntBASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 ABAT-202ENST00000396600 5586 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 HAVCR1-201ENST00000339252 1845 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 EIF1AD-204ENST00000526451 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 PLXNA4-204ENST00000423507 3314 ntTSL 2 BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 OGDH-205ENST00000444676 3309 ntTSL 5 BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 AC022915.2-201ENST00000522575 2372 ntTSL 2 BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 AC024651.1-201ENST00000561121 1963 ntTSL 3 BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 KIF13A-213ENST00000636847 5538 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 GUCY1A2-203ENST00000526355 16205 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 OR2W5-203ENST00000641857 1597 ntBASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 SYNJ1-201ENST00000357345 7059 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 SYNJ1-203ENST00000382499 7094 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 ALKBH8-206ENST00000429370 2296 ntTSL 2 BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 CAPZA2-201ENST00000361183 5182 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 ERLIN2-206ENST00000519638 1718 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 AP001020.3-201ENST00000583314 1714 ntBASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 KLHL32-204ENST00000536676 3699 ntTSL 2 BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 CUL4A-212ENST00000617546 5666 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 TRAK2-201ENST00000332624 6510 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 ADAR-201ENST00000368471 6515 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 EPB41-203ENST00000349460 3029 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 ACOX2-202ENST00000459701 2348 ntTSL 5 BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 CASP7-211ENST00000621345 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 STAG3-201ENST00000317296 4198 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
NPIPA3F8WFD2 CREB3L4-201ENST00000271889 1750 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
NPIPA3F8WFD2 AL355377.2-201ENST00000623595 1751 ntBASIC9.52□□□□□ -0.88
NPIPA3F8WFD2 COL12A1-201ENST00000322507 11723 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.88
NPIPA3F8WFD2 THAP1-202ENST00000345117 1943 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
NPIPA3F8WFD2 BEAN1-207ENST00000564819 2929 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
NPIPA3F8WFD2 TWISTNB-201ENST00000222567 3942 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
NPIPA3F8WFD2 CFAP69-201ENST00000389297 3902 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
NPIPA3F8WFD2 NREP-205ENST00000446294 2065 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.88
NPIPA3F8WFD2 BRINP1-201ENST00000265922 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
NPIPA3F8WFD2 COX19-201ENST00000344111 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
NPIPA3F8WFD2 MAPRE2-209ENST00000588910 1389 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
NPIPA3F8WFD2 DDX31-205ENST00000438527 2814 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
NPIPA3F8WFD2 DENND5B-203ENST00000536562 4291 ntTSL 2 BASIC9.52□□□□□ -0.88
NPIPA3F8WFD2 PRUNE1-201ENST00000271620 2997 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
NPIPA3F8WFD2 POLR3G-201ENST00000399107 3285 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 1081.6 ms