Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 PCK1-201ENST00000319441 4341 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04436 ZFP64-202ENST00000346617 2876 ntTSL 2 BASIC9.6□□□□□ -0.87
P04436 AC079610.1-201ENST00000360083 1727 ntTSL 2 BASIC9.6□□□□□ -0.87
P04436 AHSG-202ENST00000411641 1711 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04436 KDM4D-202ENST00000536741 2737 ntAPPRIS P1 TSL 4 BASIC9.6□□□□□ -0.87
P04436 FAM114A1-206ENST00000515037 1431 ntTSL 2 BASIC9.6□□□□□ -0.87
P04436 AC009831.2-201ENST00000581802 1441 ntBASIC9.6□□□□□ -0.87
P04436 WSB1-201ENST00000262394 5139 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04436 TGIF2LX-201ENST00000283891 906 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04436 PTGR1-201ENST00000309195 1223 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04436 ETNK2-201ENST00000367197 843 ntTSL 3 BASIC9.6□□□□□ -0.87
P04436 TRBV5-6-201ENST00000390375 384 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
P04436 KRT18P19-201ENST00000395181 705 ntBASIC9.6□□□□□ -0.87
P04436 RPSAP9-201ENST00000418207 888 ntBASIC9.6□□□□□ -0.87
P04436 FAM230B-204ENST00000421576 598 ntTSL 5 BASIC9.6□□□□□ -0.87
P04436 LINC01039-201ENST00000437113 650 ntTSL 5 BASIC9.6□□□□□ -0.87
P04436 AC096631.1-202ENST00000440162 917 ntTSL 2 BASIC9.6□□□□□ -0.87
P04436 TRAF3IP2-AS1-207ENST00000456352 484 ntTSL 5 BASIC9.6□□□□□ -0.87
P04436 ACA64.3-201ENST00000459613 127 ntBASIC9.6□□□□□ -0.87
P04436 RN7SL100P-201ENST00000460565 293 ntBASIC9.6□□□□□ -0.87
P04436 RN7SL125P-201ENST00000480790 294 ntBASIC9.6□□□□□ -0.87
P04436 AC074276.1-201ENST00000486836 613 ntBASIC9.6□□□□□ -0.87
P04436 STIP1-211ENST00000543847 772 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
P04436 FAHD2P1-201ENST00000546381 939 ntBASIC9.6□□□□□ -0.87
P04436 MRPL2P1-201ENST00000546688 919 ntBASIC9.6□□□□□ -0.87
P04436 AC010203.1-201ENST00000548404 928 ntTSL 3 BASIC9.6□□□□□ -0.87
P04436 TGIF2LX-202ENST00000561129 928 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
P04436 YWHAE-210ENST00000573026 780 ntTSL 3 BASIC9.6□□□□□ -0.87
P04436 AC091027.2-201ENST00000578030 179 ntTSL 5 BASIC9.6□□□□□ -0.87
P04436 RN7SL96P-201ENST00000582641 283 ntBASIC9.6□□□□□ -0.87
P04436 AC005828.4-201ENST00000584608 552 ntTSL 4 BASIC9.6□□□□□ -0.87
P04436 SNORD3A-201ENST00000584923 699 ntBASIC9.6□□□□□ -0.87
P04436 DNAH17-AS1-201ENST00000588565 513 ntTSL 2 BASIC9.6□□□□□ -0.87
P04436 AC079210.1-201ENST00000589826 384 ntTSL 2 BASIC9.6□□□□□ -0.87
P04436 VPS4B-207ENST00000591519 551 ntTSL 2 BASIC9.6□□□□□ -0.87
P04436 TMCC1-AS1-202ENST00000604747 413 ntTSL 5 BASIC9.6□□□□□ -0.87
P04436 AL110115.2-201ENST00000611296 325 ntBASIC9.6□□□□□ -0.87
P04436 AC010335.2-201ENST00000623166 528 ntBASIC9.6□□□□□ -0.87
P04436 CBR3-AS1-211ENST00000623579 651 ntTSL 5 BASIC9.6□□□□□ -0.87
P04436 CBR3-AS1-212ENST00000623638 885 ntTSL 5 BASIC9.6□□□□□ -0.87
P04436 CBR3-AS1-214ENST00000624080 822 ntTSL 5 BASIC9.6□□□□□ -0.87
P04436 AP001525.1-201ENST00000624611 236 ntBASIC9.6□□□□□ -0.87
P04436 CBR3-AS1-217ENST00000625079 743 ntTSL 5 BASIC9.6□□□□□ -0.87
P04436 CBR3-AS1-218ENST00000625189 517 ntTSL 5 BASIC9.6□□□□□ -0.87
P04436 AC092902.2-220ENST00000626334 685 ntTSL 5 BASIC9.6□□□□□ -0.87
P04436 SERPINB7-201ENST00000336429 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04436 AC024651.1-201ENST00000561121 1963 ntTSL 3 BASIC9.6□□□□□ -0.87
P04436 BCAS3-203ENST00000408905 3514 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
P04436 IGSF1-203ENST00000370901 1820 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
P04436 DAB1-203ENST00000371231 1802 ntTSL 5 BASIC9.6□□□□□ -0.87
P04436 ITGA7-203ENST00000452168 3763 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
P04436 RBBP6-201ENST00000319715 6229 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04436 EPB41-203ENST00000349460 3029 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
P04436 DPPA2-201ENST00000478945 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04436 AL133245.1-201ENST00000608925 1365 ntBASIC9.6□□□□□ -0.87
P04436 RIT1-202ENST00000368323 3445 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04436 TM9SF2-201ENST00000376387 3430 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04436 RSPH10B-208ENST00000539903 2881 ntTSL 5 BASIC9.6□□□□□ -0.87
P04436 GIT2-203ENST00000355312 5466 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04436 DNAL1-201ENST00000311089 2312 ntTSL 2 BASIC9.6□□□□□ -0.87
P04436 PPP6R3-202ENST00000265637 4783 ntTSL 5 BASIC9.6□□□□□ -0.87
P04436 LIMCH1-203ENST00000396595 5740 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
P04436 MARVELD2-201ENST00000325631 2153 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04436 TLE3-222ENST00000560589 3509 ntTSL 5 BASIC9.6□□□□□ -0.87
P04436 CRP-201ENST00000255030 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04436 DDX39B-214ENST00000458640 2003 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
P04436 NUP85-211ENST00000579324 2010 ntTSL 2 BASIC9.6□□□□□ -0.87
P04436 COPZ1-201ENST00000262061 1897 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
P04436 PCNT-201ENST00000359568 10560 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
P04436 AC022167.2-201ENST00000565934 2288 ntTSL 3 BASIC9.59□□□□□ -0.87
P04436 MROH7-201ENST00000339553 3459 ntTSL 5 BASIC9.59□□□□□ -0.87
P04436 ATP5G3-201ENST00000284727 5484 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
P04436 ZFYVE9P1-201ENST00000416133 1724 ntBASIC9.59□□□□□ -0.87
P04436 HACL1-209ENST00000457447 1721 ntTSL 2 BASIC9.59□□□□□ -0.87
P04436 EEF1A1P32-201ENST00000418613 1347 ntBASIC9.59□□□□□ -0.87
P04436 FCAMR-204ENST00000450945 1307 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
P04436 DDI1-201ENST00000302259 2609 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
P04436 TEC-201ENST00000381501 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
P04436 OR2W5-203ENST00000641857 1597 ntBASIC9.59□□□□□ -0.87
P04436 MED23-205ENST00000368068 5233 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
P04436 HAVCR1-201ENST00000339252 1845 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
P04436 MED18-201ENST00000373842 1833 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
P04436 SLC16A6-205ENST00000620436 2055 ntTSL 5 BASIC9.59□□□□□ -0.87
P04436 FBN2-208ENST00000619499 10154 ntTSL 5 BASIC9.59□□□□□ -0.87
P04436 MRS2-204ENST00000443868 3980 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
P04436 RHAG-201ENST00000229810 1283 ntAPPRIS ALT1 TSL 5 BASIC9.59□□□□□ -0.87
P04436 RPL21-202ENST00000311549 815 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
P04436 SPAG11B-202ENST00000317900 806 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
P04436 TAC4-201ENST00000326219 597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
P04436 OR5D14-201ENST00000335605 945 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
P04436 TRDV2-201ENST00000390469 520 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
P04436 CYCSP55-201ENST00000399027 311 ntBASIC9.59□□□□□ -0.87
P04436 SPAG11A-204ENST00000400125 806 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
P04436 RPS27A-202ENST00000402285 705 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
P04436 AL662800.1-201ENST00000415195 851 ntTSL 2 BASIC9.59□□□□□ -0.87
P04436 PROSER3-203ENST00000421853 650 ntAPPRIS ALT2 TSL 3 BASIC9.59□□□□□ -0.87
P04436 PGAM4P1-201ENST00000426407 654 ntBASIC9.59□□□□□ -0.87
P04436 AL133553.1-201ENST00000428391 353 ntTSL 3 BASIC9.59□□□□□ -0.87
P04436 TAC4-205ENST00000436235 657 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
P04436 PNLIPP1-201ENST00000439233 675 ntBASIC9.59□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms