Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
TSSC4Q9Y5U2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC16.36■□□□□ 0.21
TSSC4Q9Y5U2 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TSSC4Q9Y5U2 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TSSC4Q9Y5U2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.36■□□□□ 0.21
TSSC4Q9Y5U2 AC069236.1-201ENST00000604339 616 ntBASIC16.36■□□□□ 0.21
TSSC4Q9Y5U2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.36■□□□□ 0.21
TSSC4Q9Y5U2 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.36■□□□□ 0.21
TSSC4Q9Y5U2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.36■□□□□ 0.21
TSSC4Q9Y5U2 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TSSC4Q9Y5U2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TSSC4Q9Y5U2 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.36■□□□□ 0.21
TSSC4Q9Y5U2 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TSSC4Q9Y5U2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC16.36■□□□□ 0.21
TSSC4Q9Y5U2 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC16.36■□□□□ 0.21
TSSC4Q9Y5U2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.36■□□□□ 0.21
TSSC4Q9Y5U2 AC092053.2-201ENST00000640557 1818 ntBASIC16.35■□□□□ 0.21
TSSC4Q9Y5U2 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TSSC4Q9Y5U2 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC16.35■□□□□ 0.21
TSSC4Q9Y5U2 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TSSC4Q9Y5U2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TSSC4Q9Y5U2 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TSSC4Q9Y5U2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.35■□□□□ 0.21
TSSC4Q9Y5U2 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.35■□□□□ 0.21
TSSC4Q9Y5U2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TSSC4Q9Y5U2 GUSBP6-202ENST00000438529 1198 ntBASIC16.35■□□□□ 0.21
TSSC4Q9Y5U2 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TSSC4Q9Y5U2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TSSC4Q9Y5U2 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TSSC4Q9Y5U2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TSSC4Q9Y5U2 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TSSC4Q9Y5U2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TSSC4Q9Y5U2 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.35■□□□□ 0.21
TSSC4Q9Y5U2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TSSC4Q9Y5U2 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TSSC4Q9Y5U2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TSSC4Q9Y5U2 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
TSSC4Q9Y5U2 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TSSC4Q9Y5U2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TSSC4Q9Y5U2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.34■□□□□ 0.21
TSSC4Q9Y5U2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.34■□□□□ 0.21
TSSC4Q9Y5U2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.34■□□□□ 0.21
TSSC4Q9Y5U2 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TSSC4Q9Y5U2 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC16.34■□□□□ 0.21
TSSC4Q9Y5U2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC16.34■□□□□ 0.21
TSSC4Q9Y5U2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.34■□□□□ 0.21
TSSC4Q9Y5U2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TSSC4Q9Y5U2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TSSC4Q9Y5U2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.34■□□□□ 0.21
TSSC4Q9Y5U2 CYP2T1P-201ENST00000432607 1285 ntBASIC16.34■□□□□ 0.21
TSSC4Q9Y5U2 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.34■□□□□ 0.21
TSSC4Q9Y5U2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TSSC4Q9Y5U2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TSSC4Q9Y5U2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.34■□□□□ 0.21
TSSC4Q9Y5U2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TSSC4Q9Y5U2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.34■□□□□ 0.21
TSSC4Q9Y5U2 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.34■□□□□ 0.21
TSSC4Q9Y5U2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.34■□□□□ 0.21
TSSC4Q9Y5U2 AC133041.1-202ENST00000642053 222 ntBASIC16.34■□□□□ 0.21
TSSC4Q9Y5U2 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
TSSC4Q9Y5U2 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.34■□□□□ 0.21
TSSC4Q9Y5U2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TSSC4Q9Y5U2 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TSSC4Q9Y5U2 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.34■□□□□ 0.21
TSSC4Q9Y5U2 AC068338.2-201ENST00000563278 1430 ntBASIC16.34■□□□□ 0.21
TSSC4Q9Y5U2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TSSC4Q9Y5U2 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TSSC4Q9Y5U2 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TSSC4Q9Y5U2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
TSSC4Q9Y5U2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TSSC4Q9Y5U2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.34■□□□□ 0.21
TSSC4Q9Y5U2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC16.33■□□□□ 0.21
TSSC4Q9Y5U2 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TSSC4Q9Y5U2 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16.33■□□□□ 0.21
TSSC4Q9Y5U2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC16.33■□□□□ 0.21
TSSC4Q9Y5U2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TSSC4Q9Y5U2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TSSC4Q9Y5U2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TSSC4Q9Y5U2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.21
TSSC4Q9Y5U2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC16.33■□□□□ 0.21
TSSC4Q9Y5U2 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TSSC4Q9Y5U2 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TSSC4Q9Y5U2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TSSC4Q9Y5U2 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TSSC4Q9Y5U2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.33■□□□□ 0.2
TSSC4Q9Y5U2 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.33■□□□□ 0.2
TSSC4Q9Y5U2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.33■□□□□ 0.2
TSSC4Q9Y5U2 CD99P1-205ENST00000527459 561 ntBASIC16.33■□□□□ 0.2
TSSC4Q9Y5U2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
TSSC4Q9Y5U2 OR10C1-204ENST00000622521 1039 ntBASIC16.33■□□□□ 0.2
TSSC4Q9Y5U2 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TSSC4Q9Y5U2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.33■□□□□ 0.2
TSSC4Q9Y5U2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TSSC4Q9Y5U2 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TSSC4Q9Y5U2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.33■□□□□ 0.2
TSSC4Q9Y5U2 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC16.32■□□□□ 0.2
TSSC4Q9Y5U2 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TSSC4Q9Y5U2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TSSC4Q9Y5U2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TSSC4Q9Y5U2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms