Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.59■□□□□ 0.89
PCDHGA4Q9Y5G9 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA4Q9Y5G9 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA4Q9Y5G9 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA4Q9Y5G9 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
PCDHGA4Q9Y5G9 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA4Q9Y5G9 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGA4Q9Y5G9 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGA4Q9Y5G9 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGA4Q9Y5G9 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGA4Q9Y5G9 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGA4Q9Y5G9 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PCDHGA4Q9Y5G9 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGA4Q9Y5G9 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
PCDHGA4Q9Y5G9 MIR663A-201ENST00000385250 93 ntBASIC20.58■□□□□ 0.89
PCDHGA4Q9Y5G9 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGA4Q9Y5G9 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGA4Q9Y5G9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.58■□□□□ 0.89
PCDHGA4Q9Y5G9 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHGA4Q9Y5G9 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.58■□□□□ 0.88
PCDHGA4Q9Y5G9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHGA4Q9Y5G9 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHGA4Q9Y5G9 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PCDHGA4Q9Y5G9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHGA4Q9Y5G9 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDHGA4Q9Y5G9 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGA4Q9Y5G9 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHGA4Q9Y5G9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGA4Q9Y5G9 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.57■□□□□ 0.88
PCDHGA4Q9Y5G9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGA4Q9Y5G9 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGA4Q9Y5G9 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA4Q9Y5G9 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHGA4Q9Y5G9 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA4Q9Y5G9 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDHGA4Q9Y5G9 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA4Q9Y5G9 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHGA4Q9Y5G9 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA4Q9Y5G9 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA4Q9Y5G9 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA4Q9Y5G9 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PCDHGA4Q9Y5G9 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.56■□□□□ 0.88
PCDHGA4Q9Y5G9 AC011767.1-201ENST00000617410 1153 ntBASIC20.56■□□□□ 0.88
PCDHGA4Q9Y5G9 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA4Q9Y5G9 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA4Q9Y5G9 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA4Q9Y5G9 AL158211.5-201ENST00000623583 2518 ntBASIC20.56■□□□□ 0.88
PCDHGA4Q9Y5G9 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA4Q9Y5G9 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHGA4Q9Y5G9 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA4Q9Y5G9 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PCDHGA4Q9Y5G9 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA4Q9Y5G9 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHGA4Q9Y5G9 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA4Q9Y5G9 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA4Q9Y5G9 KRT18P11-201ENST00000435214 1283 ntBASIC20.55■□□□□ 0.88
PCDHGA4Q9Y5G9 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.55■□□□□ 0.88
PCDHGA4Q9Y5G9 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.55■□□□□ 0.88
PCDHGA4Q9Y5G9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHGA4Q9Y5G9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDHGA4Q9Y5G9 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA4Q9Y5G9 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.55■□□□□ 0.88
PCDHGA4Q9Y5G9 AC012183.1-201ENST00000625197 499 ntBASIC20.55■□□□□ 0.88
PCDHGA4Q9Y5G9 TMEM191A-211ENST00000637163 1067 ntBASIC20.55■□□□□ 0.88
PCDHGA4Q9Y5G9 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA4Q9Y5G9 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA4Q9Y5G9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA4Q9Y5G9 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA4Q9Y5G9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA4Q9Y5G9 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA4Q9Y5G9 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA4Q9Y5G9 AC009237.3-201ENST00000393279 1427 ntBASIC20.54■□□□□ 0.88
PCDHGA4Q9Y5G9 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA4Q9Y5G9 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.54■□□□□ 0.88
PCDHGA4Q9Y5G9 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA4Q9Y5G9 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA4Q9Y5G9 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA4Q9Y5G9 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA4Q9Y5G9 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.54■□□□□ 0.88
PCDHGA4Q9Y5G9 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.54■□□□□ 0.88
PCDHGA4Q9Y5G9 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDHGA4Q9Y5G9 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PCDHGA4Q9Y5G9 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.54■□□□□ 0.88
PCDHGA4Q9Y5G9 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA4Q9Y5G9 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA4Q9Y5G9 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA4Q9Y5G9 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.54■□□□□ 0.88
PCDHGA4Q9Y5G9 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDHGA4Q9Y5G9 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA4Q9Y5G9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PCDHGA4Q9Y5G9 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA4Q9Y5G9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA4Q9Y5G9 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHGA4Q9Y5G9 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHGA4Q9Y5G9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA4Q9Y5G9 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHGA4Q9Y5G9 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PCDHGA4Q9Y5G9 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA4Q9Y5G9 GPX1P1-201ENST00000388829 606 ntBASIC20.53■□□□□ 0.88
PCDHGA4Q9Y5G9 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms