Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHB1Q9Y5F3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.98■□□□□ 0.95
PCDHB1Q9Y5F3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHB1Q9Y5F3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHB1Q9Y5F3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.97■□□□□ 0.95
PCDHB1Q9Y5F3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB1Q9Y5F3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB1Q9Y5F3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB1Q9Y5F3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB1Q9Y5F3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB1Q9Y5F3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB1Q9Y5F3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
PCDHB1Q9Y5F3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.97■□□□□ 0.95
PCDHB1Q9Y5F3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.97■□□□□ 0.95
PCDHB1Q9Y5F3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDHB1Q9Y5F3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
PCDHB1Q9Y5F3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB1Q9Y5F3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB1Q9Y5F3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDHB1Q9Y5F3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHB1Q9Y5F3 AC026310.3-201ENST00000625186 2373 ntBASIC20.96■□□□□ 0.95
PCDHB1Q9Y5F3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDHB1Q9Y5F3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB1Q9Y5F3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB1Q9Y5F3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB1Q9Y5F3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.96■□□□□ 0.95
PCDHB1Q9Y5F3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB1Q9Y5F3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB1Q9Y5F3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDHB1Q9Y5F3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB1Q9Y5F3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.96■□□□□ 0.95
PCDHB1Q9Y5F3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.96■□□□□ 0.95
PCDHB1Q9Y5F3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB1Q9Y5F3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHB1Q9Y5F3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.96■□□□□ 0.95
PCDHB1Q9Y5F3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PCDHB1Q9Y5F3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
PCDHB1Q9Y5F3 AC007375.3-201ENST00000600936 2314 ntBASIC20.95■□□□□ 0.94
PCDHB1Q9Y5F3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB1Q9Y5F3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB1Q9Y5F3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
PCDHB1Q9Y5F3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDHB1Q9Y5F3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDHB1Q9Y5F3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB1Q9Y5F3 GPX1P1-201ENST00000388829 606 ntBASIC20.95■□□□□ 0.94
PCDHB1Q9Y5F3 KRT18P11-201ENST00000435214 1283 ntBASIC20.95■□□□□ 0.94
PCDHB1Q9Y5F3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.95■□□□□ 0.94
PCDHB1Q9Y5F3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDHB1Q9Y5F3 TMEM191A-211ENST00000637163 1067 ntBASIC20.95■□□□□ 0.94
PCDHB1Q9Y5F3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB1Q9Y5F3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDHB1Q9Y5F3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB1Q9Y5F3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB1Q9Y5F3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDHB1Q9Y5F3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
PCDHB1Q9Y5F3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHB1Q9Y5F3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB1Q9Y5F3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB1Q9Y5F3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB1Q9Y5F3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB1Q9Y5F3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.94■□□□□ 0.94
PCDHB1Q9Y5F3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.94■□□□□ 0.94
PCDHB1Q9Y5F3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
PCDHB1Q9Y5F3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
PCDHB1Q9Y5F3 AC079140.4-201ENST00000507448 529 ntBASIC20.94■□□□□ 0.94
PCDHB1Q9Y5F3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
PCDHB1Q9Y5F3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB1Q9Y5F3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.94■□□□□ 0.94
PCDHB1Q9Y5F3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHB1Q9Y5F3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PCDHB1Q9Y5F3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHB1Q9Y5F3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHB1Q9Y5F3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.93■□□□□ 0.94
PCDHB1Q9Y5F3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHB1Q9Y5F3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHB1Q9Y5F3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDHB1Q9Y5F3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHB1Q9Y5F3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.93■□□□□ 0.94
PCDHB1Q9Y5F3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
PCDHB1Q9Y5F3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
PCDHB1Q9Y5F3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHB1Q9Y5F3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHB1Q9Y5F3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDHB1Q9Y5F3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHB1Q9Y5F3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHB1Q9Y5F3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHB1Q9Y5F3 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PCDHB1Q9Y5F3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB1Q9Y5F3 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHB1Q9Y5F3 CD99P1-205ENST00000527459 561 ntBASIC20.92■□□□□ 0.94
PCDHB1Q9Y5F3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHB1Q9Y5F3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB1Q9Y5F3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHB1Q9Y5F3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB1Q9Y5F3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB1Q9Y5F3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB1Q9Y5F3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB1Q9Y5F3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB1Q9Y5F3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHB1Q9Y5F3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms