Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PCDHB11Q9Y5F2 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PCDHB11Q9Y5F2 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB11Q9Y5F2 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PCDHB11Q9Y5F2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHB11Q9Y5F2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.53■□□□□ 0.88
PCDHB11Q9Y5F2 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHB11Q9Y5F2 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHB11Q9Y5F2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHB11Q9Y5F2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHB11Q9Y5F2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHB11Q9Y5F2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHB11Q9Y5F2 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.52■□□□□ 0.88
PCDHB11Q9Y5F2 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.52■□□□□ 0.88
PCDHB11Q9Y5F2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.52■□□□□ 0.88
PCDHB11Q9Y5F2 CD99P1-205ENST00000527459 561 ntBASIC20.52■□□□□ 0.88
PCDHB11Q9Y5F2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PCDHB11Q9Y5F2 AC104187.1-201ENST00000607510 612 ntBASIC20.52■□□□□ 0.88
PCDHB11Q9Y5F2 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.52■□□□□ 0.88
PCDHB11Q9Y5F2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHB11Q9Y5F2 AL137060.1-201ENST00000618151 2648 ntBASIC20.52■□□□□ 0.87
PCDHB11Q9Y5F2 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB11Q9Y5F2 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB11Q9Y5F2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB11Q9Y5F2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
PCDHB11Q9Y5F2 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB11Q9Y5F2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
PCDHB11Q9Y5F2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB11Q9Y5F2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB11Q9Y5F2 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB11Q9Y5F2 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB11Q9Y5F2 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PCDHB11Q9Y5F2 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.51■□□□□ 0.87
PCDHB11Q9Y5F2 AL121832.2-201ENST00000610979 668 ntBASIC20.51■□□□□ 0.87
PCDHB11Q9Y5F2 AC231657.2-201ENST00000624556 255 ntBASIC20.51■□□□□ 0.87
PCDHB11Q9Y5F2 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB11Q9Y5F2 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDHB11Q9Y5F2 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB11Q9Y5F2 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB11Q9Y5F2 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB11Q9Y5F2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB11Q9Y5F2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDHB11Q9Y5F2 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB11Q9Y5F2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
PCDHB11Q9Y5F2 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PCDHB11Q9Y5F2 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB11Q9Y5F2 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB11Q9Y5F2 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHB11Q9Y5F2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHB11Q9Y5F2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHB11Q9Y5F2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHB11Q9Y5F2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PCDHB11Q9Y5F2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHB11Q9Y5F2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDHB11Q9Y5F2 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHB11Q9Y5F2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB11Q9Y5F2 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDHB11Q9Y5F2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB11Q9Y5F2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PCDHB11Q9Y5F2 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB11Q9Y5F2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB11Q9Y5F2 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
PCDHB11Q9Y5F2 AC007322.1-201ENST00000426983 750 ntBASIC20.48■□□□□ 0.87
PCDHB11Q9Y5F2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.48■□□□□ 0.87
PCDHB11Q9Y5F2 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB11Q9Y5F2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB11Q9Y5F2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB11Q9Y5F2 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
PCDHB11Q9Y5F2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDHB11Q9Y5F2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB11Q9Y5F2 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
PCDHB11Q9Y5F2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB11Q9Y5F2 AC026310.3-201ENST00000625186 2373 ntBASIC20.48■□□□□ 0.87
PCDHB11Q9Y5F2 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB11Q9Y5F2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB11Q9Y5F2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB11Q9Y5F2 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB11Q9Y5F2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
PCDHB11Q9Y5F2 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB11Q9Y5F2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.47■□□□□ 0.87
PCDHB11Q9Y5F2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB11Q9Y5F2 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDHB11Q9Y5F2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB11Q9Y5F2 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.47■□□□□ 0.87
PCDHB11Q9Y5F2 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.47■□□□□ 0.87
PCDHB11Q9Y5F2 MFSD11-216ENST00000590393 1141 ntBASIC20.47■□□□□ 0.87
PCDHB11Q9Y5F2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.47■□□□□ 0.87
PCDHB11Q9Y5F2 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDHB11Q9Y5F2 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB11Q9Y5F2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB11Q9Y5F2 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB11Q9Y5F2 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB11Q9Y5F2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.47■□□□□ 0.87
PCDHB11Q9Y5F2 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHB11Q9Y5F2 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.46■□□□□ 0.87
PCDHB11Q9Y5F2 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
PCDHB11Q9Y5F2 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHB11Q9Y5F2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PCDHB11Q9Y5F2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHB11Q9Y5F2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms