Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SHANK1Q9Y566 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.03■□□□□ 0.64
SHANK1Q9Y566 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SHANK1Q9Y566 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHANK1Q9Y566 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.03■□□□□ 0.64
SHANK1Q9Y566 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SHANK1Q9Y566 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHANK1Q9Y566 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHANK1Q9Y566 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHANK1Q9Y566 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SHANK1Q9Y566 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHANK1Q9Y566 UBE2SP1-201ENST00000450587 669 ntBASIC19.02■□□□□ 0.64
SHANK1Q9Y566 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.02■□□□□ 0.64
SHANK1Q9Y566 AC008175.2-201ENST00000612840 297 ntBASIC19.02■□□□□ 0.64
SHANK1Q9Y566 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.02■□□□□ 0.64
SHANK1Q9Y566 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.02■□□□□ 0.64
SHANK1Q9Y566 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.02■□□□□ 0.64
SHANK1Q9Y566 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHANK1Q9Y566 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHANK1Q9Y566 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHANK1Q9Y566 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHANK1Q9Y566 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.02■□□□□ 0.64
SHANK1Q9Y566 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHANK1Q9Y566 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.02■□□□□ 0.64
SHANK1Q9Y566 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHANK1Q9Y566 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHANK1Q9Y566 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
SHANK1Q9Y566 AC092068.2-201ENST00000590491 1708 ntBASIC19.02■□□□□ 0.63
SHANK1Q9Y566 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.02■□□□□ 0.63
SHANK1Q9Y566 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SHANK1Q9Y566 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
SHANK1Q9Y566 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
SHANK1Q9Y566 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.02■□□□□ 0.63
SHANK1Q9Y566 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.02■□□□□ 0.63
SHANK1Q9Y566 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SHANK1Q9Y566 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.63
SHANK1Q9Y566 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SHANK1Q9Y566 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHANK1Q9Y566 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHANK1Q9Y566 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.01■□□□□ 0.63
SHANK1Q9Y566 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SHANK1Q9Y566 AL355472.2-201ENST00000422958 438 ntBASIC19.01■□□□□ 0.63
SHANK1Q9Y566 ECEL1P3-201ENST00000427961 737 ntBASIC19.01■□□□□ 0.63
SHANK1Q9Y566 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SHANK1Q9Y566 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.01■□□□□ 0.63
SHANK1Q9Y566 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.01■□□□□ 0.63
SHANK1Q9Y566 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHANK1Q9Y566 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.01■□□□□ 0.63
SHANK1Q9Y566 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.01■□□□□ 0.63
SHANK1Q9Y566 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SHANK1Q9Y566 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.01■□□□□ 0.63
SHANK1Q9Y566 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHANK1Q9Y566 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHANK1Q9Y566 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SHANK1Q9Y566 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SHANK1Q9Y566 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHANK1Q9Y566 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHANK1Q9Y566 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHANK1Q9Y566 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHANK1Q9Y566 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
SHANK1Q9Y566 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19■□□□□ 0.63
SHANK1Q9Y566 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19■□□□□ 0.63
SHANK1Q9Y566 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19■□□□□ 0.63
SHANK1Q9Y566 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SHANK1Q9Y566 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19■□□□□ 0.63
SHANK1Q9Y566 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19■□□□□ 0.63
SHANK1Q9Y566 ANOS2P-203ENST00000472227 1816 ntBASIC19■□□□□ 0.63
SHANK1Q9Y566 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHANK1Q9Y566 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19■□□□□ 0.63
SHANK1Q9Y566 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHANK1Q9Y566 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19■□□□□ 0.63
SHANK1Q9Y566 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHANK1Q9Y566 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHANK1Q9Y566 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19■□□□□ 0.63
SHANK1Q9Y566 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19■□□□□ 0.63
SHANK1Q9Y566 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHANK1Q9Y566 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHANK1Q9Y566 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SHANK1Q9Y566 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SHANK1Q9Y566 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.99■□□□□ 0.63
SHANK1Q9Y566 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.99■□□□□ 0.63
SHANK1Q9Y566 MIR4497-201ENST00000583208 89 ntBASIC18.99■□□□□ 0.63
SHANK1Q9Y566 AC120498.10-201ENST00000621827 505 ntBASIC18.99■□□□□ 0.63
SHANK1Q9Y566 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHANK1Q9Y566 KRT17P1-201ENST00000399211 1546 ntBASIC18.99■□□□□ 0.63
SHANK1Q9Y566 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SHANK1Q9Y566 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHANK1Q9Y566 EP400NL-214ENST00000641289 2402 ntBASIC18.99■□□□□ 0.63
SHANK1Q9Y566 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHANK1Q9Y566 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.99■□□□□ 0.63
SHANK1Q9Y566 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.99■□□□□ 0.63
SHANK1Q9Y566 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
SHANK1Q9Y566 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.99■□□□□ 0.63
SHANK1Q9Y566 AC073912.3-201ENST00000624414 853 ntBASIC18.99■□□□□ 0.63
SHANK1Q9Y566 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SHANK1Q9Y566 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.99■□□□□ 0.63
SHANK1Q9Y566 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHANK1Q9Y566 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.98■□□□□ 0.63
SHANK1Q9Y566 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SHANK1Q9Y566 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms