Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 GOLGA2P6-201ENST00000340929 2049 ntBASIC28.82■■■□□ 2.2
NINLQ9Y2I6 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
NINLQ9Y2I6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
NINLQ9Y2I6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC28.82■■■□□ 2.2
NINLQ9Y2I6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC28.82■■■□□ 2.2
NINLQ9Y2I6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
NINLQ9Y2I6 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
NINLQ9Y2I6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
NINLQ9Y2I6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC28.82■■■□□ 2.2
NINLQ9Y2I6 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
NINLQ9Y2I6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC28.82■■■□□ 2.2
NINLQ9Y2I6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC28.82■■■□□ 2.2
NINLQ9Y2I6 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC28.82■■■□□ 2.2
NINLQ9Y2I6 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC28.82■■■□□ 2.2
NINLQ9Y2I6 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC28.82■■■□□ 2.2
NINLQ9Y2I6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC28.82■■■□□ 2.2
NINLQ9Y2I6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC28.82■■■□□ 2.2
NINLQ9Y2I6 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
NINLQ9Y2I6 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC28.81■■■□□ 2.2
NINLQ9Y2I6 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
NINLQ9Y2I6 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
NINLQ9Y2I6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
NINLQ9Y2I6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC28.81■■■□□ 2.2
NINLQ9Y2I6 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
NINLQ9Y2I6 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
NINLQ9Y2I6 MIPEPP3-201ENST00000412105 444 ntBASIC28.81■■■□□ 2.2
NINLQ9Y2I6 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
NINLQ9Y2I6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC28.81■■■□□ 2.2
NINLQ9Y2I6 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
NINLQ9Y2I6 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC28.8■■■□□ 2.2
NINLQ9Y2I6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
NINLQ9Y2I6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC28.8■■■□□ 2.2
NINLQ9Y2I6 MIR4758-201ENST00000577688 71 ntBASIC28.8■■■□□ 2.2
NINLQ9Y2I6 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC28.8■■■□□ 2.2
NINLQ9Y2I6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
NINLQ9Y2I6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC28.8■■■□□ 2.2
NINLQ9Y2I6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
NINLQ9Y2I6 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
NINLQ9Y2I6 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
NINLQ9Y2I6 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
NINLQ9Y2I6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC28.8■■■□□ 2.2
NINLQ9Y2I6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC28.8■■■□□ 2.2
NINLQ9Y2I6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC28.79■■■□□ 2.2
NINLQ9Y2I6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
NINLQ9Y2I6 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
NINLQ9Y2I6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC28.79■■■□□ 2.2
NINLQ9Y2I6 MIR4651-201ENST00000582622 73 ntBASIC28.79■■■□□ 2.2
NINLQ9Y2I6 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC28.79■■■□□ 2.2
NINLQ9Y2I6 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
NINLQ9Y2I6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
NINLQ9Y2I6 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
NINLQ9Y2I6 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
NINLQ9Y2I6 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
NINLQ9Y2I6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
NINLQ9Y2I6 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
NINLQ9Y2I6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
NINLQ9Y2I6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
NINLQ9Y2I6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
NINLQ9Y2I6 AC010980.2-201ENST00000587099 1412 ntBASIC28.78■■■□□ 2.2
NINLQ9Y2I6 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
NINLQ9Y2I6 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
NINLQ9Y2I6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
NINLQ9Y2I6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC28.78■■■□□ 2.2
NINLQ9Y2I6 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC28.78■■■□□ 2.2
NINLQ9Y2I6 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC28.77■■■□□ 2.2
NINLQ9Y2I6 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
NINLQ9Y2I6 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
NINLQ9Y2I6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
NINLQ9Y2I6 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
NINLQ9Y2I6 AC079834.2-201ENST00000609776 1949 ntBASIC28.77■■■□□ 2.2
NINLQ9Y2I6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC28.77■■■□□ 2.2
NINLQ9Y2I6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC28.77■■■□□ 2.2
NINLQ9Y2I6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC28.76■■■□□ 2.2
NINLQ9Y2I6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC28.76■■■□□ 2.2
NINLQ9Y2I6 CASP6-205ENST00000505486 538 ntTSL 4 BASIC28.76■■■□□ 2.2
NINLQ9Y2I6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC28.76■■■□□ 2.2
NINLQ9Y2I6 AC008687.6-201ENST00000596318 630 ntBASIC28.76■■■□□ 2.2
NINLQ9Y2I6 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC28.76■■■□□ 2.2
NINLQ9Y2I6 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC28.76■■■□□ 2.2
NINLQ9Y2I6 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC28.76■■■□□ 2.2
NINLQ9Y2I6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC28.76■■■□□ 2.19
NINLQ9Y2I6 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC28.76■■■□□ 2.19
NINLQ9Y2I6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
NINLQ9Y2I6 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC28.76■■■□□ 2.19
NINLQ9Y2I6 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC28.76■■■□□ 2.19
NINLQ9Y2I6 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC28.76■■■□□ 2.19
NINLQ9Y2I6 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
NINLQ9Y2I6 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC28.76■■■□□ 2.19
NINLQ9Y2I6 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC28.76■■■□□ 2.19
NINLQ9Y2I6 SAPCD2P1-201ENST00000395413 1184 ntBASIC28.75■■■□□ 2.19
NINLQ9Y2I6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC28.75■■■□□ 2.19
NINLQ9Y2I6 PPP1R14BP2-201ENST00000426284 444 ntBASIC28.75■■■□□ 2.19
NINLQ9Y2I6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC28.75■■■□□ 2.19
NINLQ9Y2I6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC28.75■■■□□ 2.19
NINLQ9Y2I6 FAM201B-201ENST00000458407 597 ntBASIC28.75■■■□□ 2.19
NINLQ9Y2I6 KLF13-207ENST00000560473 489 ntTSL 3 BASIC28.75■■■□□ 2.19
NINLQ9Y2I6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC28.75■■■□□ 2.19
NINLQ9Y2I6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC28.75■■■□□ 2.19
NINLQ9Y2I6 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
NINLQ9Y2I6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms