Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC32.6■■■□□ 2.81
CDK11AQ9UQ88 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC32.6■■■□□ 2.81
CDK11AQ9UQ88 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
CDK11AQ9UQ88 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC32.6■■■□□ 2.81
CDK11AQ9UQ88 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC32.59■■■□□ 2.81
CDK11AQ9UQ88 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC32.59■■■□□ 2.81
CDK11AQ9UQ88 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC32.59■■■□□ 2.81
CDK11AQ9UQ88 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
CDK11AQ9UQ88 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
CDK11AQ9UQ88 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC32.59■■■□□ 2.81
CDK11AQ9UQ88 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC32.59■■■□□ 2.81
CDK11AQ9UQ88 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
CDK11AQ9UQ88 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
CDK11AQ9UQ88 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
CDK11AQ9UQ88 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC32.58■■■□□ 2.81
CDK11AQ9UQ88 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
CDK11AQ9UQ88 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC32.58■■■□□ 2.81
CDK11AQ9UQ88 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC32.58■■■□□ 2.81
CDK11AQ9UQ88 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC32.58■■■□□ 2.81
CDK11AQ9UQ88 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC32.58■■■□□ 2.81
CDK11AQ9UQ88 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
CDK11AQ9UQ88 AL589743.5-201ENST00000616611 1050 ntBASIC32.58■■■□□ 2.81
CDK11AQ9UQ88 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC32.58■■■□□ 2.81
CDK11AQ9UQ88 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC32.58■■■□□ 2.81
CDK11AQ9UQ88 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC32.58■■■□□ 2.81
CDK11AQ9UQ88 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC32.57■■■□□ 2.81
CDK11AQ9UQ88 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC32.57■■■□□ 2.8
CDK11AQ9UQ88 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
CDK11AQ9UQ88 MCRIP2P1-201ENST00000394346 511 ntBASIC32.57■■■□□ 2.8
CDK11AQ9UQ88 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC32.57■■■□□ 2.8
CDK11AQ9UQ88 UNC93B4-201ENST00000505679 747 ntBASIC32.57■■■□□ 2.8
CDK11AQ9UQ88 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC32.57■■■□□ 2.8
CDK11AQ9UQ88 AC008403.3-201ENST00000598924 454 ntBASIC32.57■■■□□ 2.8
CDK11AQ9UQ88 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
CDK11AQ9UQ88 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
CDK11AQ9UQ88 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
CDK11AQ9UQ88 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC32.56■■■□□ 2.8
CDK11AQ9UQ88 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
CDK11AQ9UQ88 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC32.56■■■□□ 2.8
CDK11AQ9UQ88 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
CDK11AQ9UQ88 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC32.56■■■□□ 2.8
CDK11AQ9UQ88 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC32.56■■■□□ 2.8
CDK11AQ9UQ88 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
CDK11AQ9UQ88 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
CDK11AQ9UQ88 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
CDK11AQ9UQ88 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
CDK11AQ9UQ88 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC32.55■■■□□ 2.8
CDK11AQ9UQ88 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC32.55■■■□□ 2.8
CDK11AQ9UQ88 SAPCD2P1-201ENST00000395413 1184 ntBASIC32.55■■■□□ 2.8
CDK11AQ9UQ88 AL596275.1-201ENST00000423464 877 ntBASIC32.55■■■□□ 2.8
CDK11AQ9UQ88 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC32.55■■■□□ 2.8
CDK11AQ9UQ88 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
CDK11AQ9UQ88 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC32.55■■■□□ 2.8
CDK11AQ9UQ88 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC32.55■■■□□ 2.8
CDK11AQ9UQ88 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC32.55■■■□□ 2.8
CDK11AQ9UQ88 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC32.54■■■□□ 2.8
CDK11AQ9UQ88 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
CDK11AQ9UQ88 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CDK11AQ9UQ88 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC32.54■■■□□ 2.8
CDK11AQ9UQ88 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC32.54■■■□□ 2.8
CDK11AQ9UQ88 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC32.54■■■□□ 2.8
CDK11AQ9UQ88 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC32.54■■■□□ 2.8
CDK11AQ9UQ88 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC32.54■■■□□ 2.8
CDK11AQ9UQ88 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
CDK11AQ9UQ88 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC32.54■■■□□ 2.8
CDK11AQ9UQ88 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CDK11AQ9UQ88 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
CDK11AQ9UQ88 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CDK11AQ9UQ88 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC32.53■■■□□ 2.8
CDK11AQ9UQ88 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CDK11AQ9UQ88 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC32.53■■■□□ 2.8
CDK11AQ9UQ88 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CDK11AQ9UQ88 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
CDK11AQ9UQ88 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CDK11AQ9UQ88 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
CDK11AQ9UQ88 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
CDK11AQ9UQ88 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC32.52■■■□□ 2.8
CDK11AQ9UQ88 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
CDK11AQ9UQ88 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC32.52■■■□□ 2.8
CDK11AQ9UQ88 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC32.52■■■□□ 2.8
CDK11AQ9UQ88 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
CDK11AQ9UQ88 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC32.52■■■□□ 2.8
CDK11AQ9UQ88 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC32.52■■■□□ 2.8
CDK11AQ9UQ88 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC32.52■■■□□ 2.8
CDK11AQ9UQ88 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
CDK11AQ9UQ88 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
CDK11AQ9UQ88 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC32.51■■■□□ 2.79
CDK11AQ9UQ88 UBE2SP1-201ENST00000450587 669 ntBASIC32.51■■■□□ 2.79
CDK11AQ9UQ88 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC32.51■■■□□ 2.79
CDK11AQ9UQ88 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC32.51■■■□□ 2.79
CDK11AQ9UQ88 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
CDK11AQ9UQ88 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
CDK11AQ9UQ88 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC32.51■■■□□ 2.79
CDK11AQ9UQ88 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
CDK11AQ9UQ88 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC32.51■■■□□ 2.79
CDK11AQ9UQ88 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
CDK11AQ9UQ88 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC32.5■■■□□ 2.79
CDK11AQ9UQ88 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
CDK11AQ9UQ88 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC32.5■■■□□ 2.79
CDK11AQ9UQ88 VMO1-204ENST00000441199 741 ntTSL 2 BASIC32.5■■■□□ 2.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms