Protein–RNA interactions for Protein: Q9P2K3

RCOR3, REST corepressor 3, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCOR3Q9P2K3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RCOR3Q9P2K3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RCOR3Q9P2K3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RCOR3Q9P2K3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RCOR3Q9P2K3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
RCOR3Q9P2K3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RCOR3Q9P2K3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.59■■□□□ 1.05
RCOR3Q9P2K3 AC097381.1-201ENST00000429019 1296 ntBASIC21.59■■□□□ 1.05
RCOR3Q9P2K3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.59■■□□□ 1.05
RCOR3Q9P2K3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RCOR3Q9P2K3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.59■■□□□ 1.05
RCOR3Q9P2K3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.59■■□□□ 1.05
RCOR3Q9P2K3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.59■■□□□ 1.05
RCOR3Q9P2K3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RCOR3Q9P2K3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.58■■□□□ 1.05
RCOR3Q9P2K3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
RCOR3Q9P2K3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.58■■□□□ 1.05
RCOR3Q9P2K3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.58■■□□□ 1.05
RCOR3Q9P2K3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RCOR3Q9P2K3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.58■■□□□ 1.05
RCOR3Q9P2K3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.58■■□□□ 1.05
RCOR3Q9P2K3 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.58■■□□□ 1.05
RCOR3Q9P2K3 KRT18P20-201ENST00000548986 1279 ntBASIC21.58■■□□□ 1.05
RCOR3Q9P2K3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.58■■□□□ 1.05
RCOR3Q9P2K3 AP001160.3-201ENST00000601484 763 ntBASIC21.58■■□□□ 1.05
RCOR3Q9P2K3 AC120498.10-201ENST00000621827 505 ntBASIC21.58■■□□□ 1.05
RCOR3Q9P2K3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.58■■□□□ 1.05
RCOR3Q9P2K3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RCOR3Q9P2K3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
RCOR3Q9P2K3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RCOR3Q9P2K3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.58■■□□□ 1.04
RCOR3Q9P2K3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.04
RCOR3Q9P2K3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RCOR3Q9P2K3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RCOR3Q9P2K3 AC004854.2-201ENST00000608450 1441 ntBASIC21.57■■□□□ 1.04
RCOR3Q9P2K3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RCOR3Q9P2K3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RCOR3Q9P2K3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
RCOR3Q9P2K3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
RCOR3Q9P2K3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RCOR3Q9P2K3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.57■■□□□ 1.04
RCOR3Q9P2K3 MIR6821-201ENST00000617625 74 ntBASIC21.57■■□□□ 1.04
RCOR3Q9P2K3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
RCOR3Q9P2K3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.57■■□□□ 1.04
RCOR3Q9P2K3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.57■■□□□ 1.04
RCOR3Q9P2K3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RCOR3Q9P2K3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RCOR3Q9P2K3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RCOR3Q9P2K3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.56■■□□□ 1.04
RCOR3Q9P2K3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RCOR3Q9P2K3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.56■■□□□ 1.04
RCOR3Q9P2K3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RCOR3Q9P2K3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RCOR3Q9P2K3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RCOR3Q9P2K3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
RCOR3Q9P2K3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RCOR3Q9P2K3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.56■■□□□ 1.04
RCOR3Q9P2K3 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RCOR3Q9P2K3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RCOR3Q9P2K3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RCOR3Q9P2K3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
RCOR3Q9P2K3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.56■■□□□ 1.04
RCOR3Q9P2K3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
RCOR3Q9P2K3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RCOR3Q9P2K3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.56■■□□□ 1.04
RCOR3Q9P2K3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
RCOR3Q9P2K3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RCOR3Q9P2K3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RCOR3Q9P2K3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RCOR3Q9P2K3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.55■■□□□ 1.04
RCOR3Q9P2K3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.55■■□□□ 1.04
RCOR3Q9P2K3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RCOR3Q9P2K3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RCOR3Q9P2K3 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RCOR3Q9P2K3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
RCOR3Q9P2K3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
RCOR3Q9P2K3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RCOR3Q9P2K3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
RCOR3Q9P2K3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RCOR3Q9P2K3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RCOR3Q9P2K3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RCOR3Q9P2K3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RCOR3Q9P2K3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RCOR3Q9P2K3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RCOR3Q9P2K3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.54■■□□□ 1.04
RCOR3Q9P2K3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RCOR3Q9P2K3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RCOR3Q9P2K3 KRT19P1-201ENST00000405746 1186 ntBASIC21.54■■□□□ 1.04
RCOR3Q9P2K3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
RCOR3Q9P2K3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.54■■□□□ 1.04
RCOR3Q9P2K3 RARRES2P6-201ENST00000567333 442 ntBASIC21.54■■□□□ 1.04
RCOR3Q9P2K3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RCOR3Q9P2K3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
RCOR3Q9P2K3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.54■■□□□ 1.04
RCOR3Q9P2K3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.54■■□□□ 1.04
RCOR3Q9P2K3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
RCOR3Q9P2K3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RCOR3Q9P2K3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RCOR3Q9P2K3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RCOR3Q9P2K3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms