Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.16■□□□□ 0.98
HACD3Q9P035 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HACD3Q9P035 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HACD3Q9P035 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
HACD3Q9P035 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HACD3Q9P035 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.16■□□□□ 0.98
HACD3Q9P035 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.16■□□□□ 0.98
HACD3Q9P035 DUX4L2-201ENST00000561772 1275 ntBASIC21.16■□□□□ 0.98
HACD3Q9P035 RARRES2P6-201ENST00000567333 442 ntBASIC21.16■□□□□ 0.98
HACD3Q9P035 AC138907.5-202ENST00000569484 235 ntBASIC21.16■□□□□ 0.98
HACD3Q9P035 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.16■□□□□ 0.98
HACD3Q9P035 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.16■□□□□ 0.98
HACD3Q9P035 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.16■□□□□ 0.98
HACD3Q9P035 DUX4L6-201ENST00000626483 1275 ntBASIC21.16■□□□□ 0.98
HACD3Q9P035 DUX4L1-201ENST00000627662 1275 ntBASIC21.16■□□□□ 0.98
HACD3Q9P035 DUX4L8-201ENST00000629013 1275 ntBASIC21.16■□□□□ 0.98
HACD3Q9P035 DUX4L3-201ENST00000630187 1275 ntBASIC21.16■□□□□ 0.98
HACD3Q9P035 DUX4L7-201ENST00000630678 1275 ntBASIC21.16■□□□□ 0.98
HACD3Q9P035 DUX4L5-201ENST00000630834 1275 ntBASIC21.16■□□□□ 0.98
HACD3Q9P035 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.16■□□□□ 0.98
HACD3Q9P035 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HACD3Q9P035 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HACD3Q9P035 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
HACD3Q9P035 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.16■□□□□ 0.98
HACD3Q9P035 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HACD3Q9P035 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
HACD3Q9P035 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.15■□□□□ 0.98
HACD3Q9P035 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HACD3Q9P035 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
HACD3Q9P035 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
HACD3Q9P035 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HACD3Q9P035 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.15■□□□□ 0.98
HACD3Q9P035 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HACD3Q9P035 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HACD3Q9P035 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HACD3Q9P035 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.15■□□□□ 0.98
HACD3Q9P035 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HACD3Q9P035 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HACD3Q9P035 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HACD3Q9P035 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HACD3Q9P035 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
HACD3Q9P035 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
HACD3Q9P035 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
HACD3Q9P035 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.14■□□□□ 0.97
HACD3Q9P035 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HACD3Q9P035 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
HACD3Q9P035 AC026271.2-201ENST00000428091 497 ntBASIC21.14■□□□□ 0.97
HACD3Q9P035 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.14■□□□□ 0.97
HACD3Q9P035 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.14■□□□□ 0.97
HACD3Q9P035 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.14■□□□□ 0.97
HACD3Q9P035 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.14■□□□□ 0.97
HACD3Q9P035 AC087623.3-201ENST00000607047 1098 ntBASIC21.14■□□□□ 0.97
HACD3Q9P035 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
HACD3Q9P035 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HACD3Q9P035 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
HACD3Q9P035 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
HACD3Q9P035 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.13■□□□□ 0.97
HACD3Q9P035 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
HACD3Q9P035 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
HACD3Q9P035 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.13■□□□□ 0.97
HACD3Q9P035 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
HACD3Q9P035 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
HACD3Q9P035 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.13■□□□□ 0.97
HACD3Q9P035 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.13■□□□□ 0.97
HACD3Q9P035 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.13■□□□□ 0.97
HACD3Q9P035 AC008175.2-201ENST00000612840 297 ntBASIC21.13■□□□□ 0.97
HACD3Q9P035 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HACD3Q9P035 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.13■□□□□ 0.97
HACD3Q9P035 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
HACD3Q9P035 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HACD3Q9P035 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
HACD3Q9P035 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.13■□□□□ 0.97
HACD3Q9P035 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HACD3Q9P035 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
HACD3Q9P035 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
HACD3Q9P035 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HACD3Q9P035 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HACD3Q9P035 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
HACD3Q9P035 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HACD3Q9P035 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HACD3Q9P035 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
HACD3Q9P035 POU5F1P4-201ENST00000413175 1085 ntBASIC21.12■□□□□ 0.97
HACD3Q9P035 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.12■□□□□ 0.97
HACD3Q9P035 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HACD3Q9P035 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HACD3Q9P035 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.12■□□□□ 0.97
HACD3Q9P035 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.12■□□□□ 0.97
HACD3Q9P035 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.12■□□□□ 0.97
HACD3Q9P035 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
HACD3Q9P035 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HACD3Q9P035 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HACD3Q9P035 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
HACD3Q9P035 AP004607.4-201ENST00000530158 1459 ntBASIC21.12■□□□□ 0.97
HACD3Q9P035 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.12■□□□□ 0.97
HACD3Q9P035 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.12■□□□□ 0.97
HACD3Q9P035 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HACD3Q9P035 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.12■□□□□ 0.97
HACD3Q9P035 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HACD3Q9P035 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HACD3Q9P035 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms